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- Filename
- 1136_7OO-T1-TDNA-1_A23WGJTLT4_2_vs_1136_7OO-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
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- s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_dna/hmnz_cgp_dna_exp0034__70824045--20260606-020246/1136_7OO-T1-TDNA-1_A23WGJTLT4_2_vs_1136_7OO-N1-BDNA-1_A237CFYLT3_1/variants/dna_fusions/1136_7OO-T1-TDNA-1_A23WGJTLT4_2_vs_1136_7OO-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
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- 8.6 KB
- Workflow Run
- hmnz-cgp-dna-exp0034-20260606-020246
- Published
- Jun 05, 2026 7:05 PM
Content
View in new tab| sample | sv_id | sv_type | svtype_standard | chr1 | pos1 | chr2 | pos2 | gene1 | region1 | strand1 | gene2 | region2 | strand2 | qual | filter | svlen | imprecise | tumor_gt | tumor_pr | tumor_sr | mate_id |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:5111:0:1:0:0:0 | DELETION | DEL | chr1 | 35192773 | chr1 | 35192996 | SFPQ | EXON:1 | . | Y_RNA | INTERGENIC | . | . | PASS | -223 | no | . | 875,0 | 1863,17 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:71665:71665:9:0:0 | DELETION | DEL | chr1 | 156866439 | chr1 | 156866547 | NTRK1 | INTRON:3 | . | INTERGENIC | INTERGENIC | . | . | PASS | -108 | no | . | 1173,0 | 3892,26 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:72421:72421:7:4:0 | DELETION | DEL | chr1 | 169540779 | chr1 | 169541508 | F5 | EXON:13 | . | INTERGENIC | INTERGENIC | . | . | PASS | -729 | no | . | 975,29 | 1767,12 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:42684:42684:5:4:0 | DELETION | DEL | chr1 | 186307546 | chr1 | 186308200 | PRG4 | EXON:7 | . | TPR | INTERGENIC | . | . | MinSomaticScore | -654 | no | . | 1904,49 | 2366,38 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:61966:61966:31:0:0:0 | TRANSLOCATION | BND | chr2 | 38983222 | chr2 | 38983353 | SOS1 | EXON:23 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 1318,2 | 2820,2 | MantaBND:0:61966:61966:31:0:0:1 |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:61966:61966:31:0:0:1 | TRANSLOCATION | BND | chr2 | 38983349 | chr2 | 38983226 | SOS1 | EXON:23 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 1318,2 | 2820,2 | MantaBND:0:61966:61966:31:0:0:0 |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:62774:62777:2:2:0 | DELETION | DEL | chr2 | 73448635 | chr2 | 73449352 | ALMS1 | EXON:8 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -717 | no | . | 428,19 | 785,4 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:64682:64682:2:5:0 | DELETION | DEL | chr2 | 178652300 | chr2 | 178653077 | TTN | EXON:202 | . | TTN-AS1 | EXON:2 | . | . | PASS | -777 | no | . | 1233,37 | 1478,30 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:65196:65196:7:0:0 | DELETION | DEL | chr2 | 197419862 | chr2 | 197420011 | SF3B1 | INTRON:4 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -149 | no | . | 1023,0 | 2888,15 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:61042:61043:0:0:0 | DELETION | DEL | chr3 | 195778737 | chr3 | 195780339 | MUC4 | EXON:2 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -1602 | yes | . | 221,16 | . | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:54445:54445:6:0:0 | DELETION | DEL | chr4 | 20253143 | chr4 | 20253558 | SLIT2 | INTERGENIC | . | INTERGENIC | INTERGENIC | . | . | PASS | -415 | no | . | 2292,125 | 4019,35 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:56330:56330:5:0:0 | DELETION | DEL | chr4 | 184474599 | chr4 | 184474718 | IRF2 | INTERGENIC | . | ENSG00000270426 | INTERGENIC | . | . | PASS | -119 | no | . | 589,0 | 1943,14 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:56468:56468:9:1:0:1 | TRANSLOCATION | BND | chr4 | 186597996 | chr4 | 186598088 | FAT1 | EXON:23 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 1082,0 | 1919,10 | MantaBND:0:56468:56468:9:1:0:0 |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:56468:56468:9:1:0:0 | TRANSLOCATION | BND | chr4 | 186598083 | chr4 | 186598001 | FAT1 | EXON:23 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 1082,0 | 1919,10 | MantaBND:0:56468:56468:9:1:0:1 |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:45713:45713:0:2:0 | DELETION | DEL | chr6 | 1611782 | chr6 | 1611907 | FOXC1 | EXON:1 | . | FOXCUT | INTERGENIC | . | . | MinSomaticScore | -125 | no | . | 1455,0 | 3794,20 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDUP:TANDEM:2898:0:1:0:2:0 | DUPLICATION | DUP | chr6 | 26017104 | chr6 | 26017194 | H1-1 | EXON:1 | . | H3C1 | INTERGENIC | . | . | PASS | 90 | no | . | 456,23 | 852,35 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:2898:1:1:0:2:0 | INSERTION | INS | chr6 | 26017178 | chr6 | 26017178 | H1-1 | EXON:1 | . | H3C1 | INTERGENIC | . | . | PASS | 90 | no | . | 0,0 | 414,74 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:49273:49273:2:0:1 | DELETION | DEL | chr6 | 106105341 | chr6 | 106105524 | PRDM1 | EXON:5 | . | ENSG00000269919 | INTERGENIC | . | . | MinSomaticScore | -183 | no | . | 2172,0 | 4695,28 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:50012:50012:2:0:0 | DELETION | DEL | chr6 | 139373416 | chr6 | 139373694 | CITED2 | EXON:2 | . | ENSG00000226571 | EXON:4 | . | . | MinSomaticScore | -278 | no | . | 1145,0 | 1847,15 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:44274:44274:64:5:0 | DELETION | DEL | chr7 | 101040264 | chr7 | 101040972 | MUC17 | EXON:3 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -708 | no | . | 1622,44 | 2345,24 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:78437:78437:6:2:0 | DELETION | DEL | chr8 | 11758538 | chr8 | 11758841 | GATA4 | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | PASS | -303 | no | . | 2087,6 | 4134,65 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:78437:78437:8:1:0 | INSERTION | INS | chr8 | 11758841 | chr8 | 11758841 | GATA4 | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | PASS | 97 | no | . | 10,0 | 2252,27 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:79207:79207:31:2:0 | DELETION | DEL | chr8 | 37698107 | chr8 | 37698771 | ZNF703 | EXON:2 | . | INTERGENIC | INTERGENIC | . | . | PASS | -664 | no | . | 2883,31 | 4336,18 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:80917:80917:2:1:0 | DELETION | DEL | chr8 | 143924026 | chr8 | 143924656 | PLEC | EXON:31 | . | INTERGENIC | INTERGENIC | . | . | PASS | -630 | no | . | 877,28 | 1219,2 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:15865:15865:3:7:0 | DELETION | DEL | chr8 | 144842094 | chr8 | 144842751 | ZNF7 | EXON:6 | . | COMMD5 | GENE | . | . | PASS | -657 | no | . | 1521,40 | 1937,7 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:78022:78022:9:0:0 | DELETION | DEL | chr9 | 137010886 | chr9 | 137010959 | ABCA2 | INTRON:39 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -73 | no | . | 130,0 | 788,8 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:14386:14386:0:0:0 | DELETION | DEL | chr10 | 99535434 | chr10 | 99535525 | NKX2-3 | EXON:2 | . | LINC01475 | INTERGENIC | . | . | MinSomaticScore | -91 | no | . | 186,0 | 622,12 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:8102:8102:41:1:0 | DELETION | DEL | chr11 | 1188584 | chr11 | 1189239 | MUC5AC | EXON:31 | . | INTERGENIC | INTERGENIC | . | . | PASS | -655 | no | . | 1740,57 | 2978,4 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:9931:9931:7:5:0 | DELETION | DEL | chr11 | 62519909 | chr11 | 62520677 | AHNAK | EXON:5 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -768 | no | . | 685,22 | 1333,10 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:4452:4452:12:1:0 | DELETION | DEL | chr12 | 12717200 | chr12 | 12718177 | CDKN1B | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | PASS | -977 | no | . | 1776,4 | 2557,17 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:4968:4968:5:0:0 | DELETION | DEL | chr12 | 40480804 | chr12 | 40483988 | MUC19 | EXON:56 | . | INTERGENIC | INTERGENIC | . | . | PASS | -3184 | yes | . | 587,26 | . | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:5093:5093:17:3:0 | DELETION | DEL | chr12 | 49059974 | chr12 | 49060883 | KMT2D | EXON:1 | . | RHEBL1 | INTERGENIC | . | . | MinSomaticScore | -909 | no | . | 2033,6 | 2645,6 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:5969:5969:30:2:0 | DELETION | DEL | chr12 | 57092108 | chr12 | 57093099 | NAB2 | INTRON:3 | . | STAT6 | INTERGENIC | . | . | MinSomaticScore | -991 | no | . | 2701,6 | 3821,5 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:5626:5626:7:0:0 | DELETION | DEL | chr12 | 57624593 | chr12 | 57624704 | ENSG00000287908 | EXON:17 | . | B4GALNT1 | EXON:11 | . | . | MinSomaticScore | -111 | no | . | 1284,0 | 4149,16 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:7003:7003:1:0:0 | DELETION | DEL | chr12 | 109768474 | chr12 | 109768577 | FAM222A | EXON:3 | . | FAM222A-AS1 | EXON:1 | . | . | MinSomaticScore | -103 | no | . | 278,0 | 1097,13 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:28569:28569:3:1:0 | DELETION | DEL | chr14 | 52267715 | chr14 | 52268544 | PTGDR | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -829 | no | . | 610,5 | 737,13 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:21611:21611:22:2:0 | DELETION | DEL | chr16 | 3879939 | chr16 | 3880225 | CREBBP | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -286 | no | . | 1631,0 | 3174,16 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:19677:19677:34:0:0 | DELETION | DEL | chr17 | 61681581 | chr17 | 61682244 | BRIP1 | EXON:20 | . | INTERGENIC | INTERGENIC | . | . | PASS | -663 | no | . | 1419,48 | 2056,22 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:36292:36292:1:0:0:0 | TRANSLOCATION | BND | chr18 | 35102076 | chr18 | 35102199 | MAPRE2 | EXON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 243,1 | 486,8 | MantaBND:0:36292:36292:1:0:0:1 |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:36292:36292:1:0:0:1 | TRANSLOCATION | BND | chr18 | 35102193 | chr18 | 35102082 | MAPRE2 | INTRON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 243,1 | 486,8 | MantaBND:0:36292:36292:1:0:0:0 |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:30625:30625:7:7:1 | DELETION | DEL | chr19 | 4511850 | chr19 | 4513335 | PLIN4 | EXON:5 | . | INTERGENIC | INTERGENIC | . | . | PASS | -1485 | no | . | 774,9 | 1733,9 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:31190:31190:4:0:0 | DELETION | DEL | chr19 | 9466620 | chr19 | 9467460 | ZNF560 | EXON:10 | . | ENSG00000287275 | INTERGENIC | . | . | PASS | -840 | no | . | 383,11 | 727,4 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:31419:31419:23:0:0 | DELETION | DEL | chr19 | 11032024 | chr19 | 11032135 | ENSG00000278643 | INTERGENIC | . | SMARCA4 | INTRON:25 | . | . | PASS | -111 | no | . | 1176,0 | 4053,45 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDUP:TANDEM:0:33161:33161:2:0:0 | DUPLICATION | DUP | chr19 | 37537519 | chr19 | 37537771 | ZNF793 | GENE | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | 252 | no | . | 366,2 | 841,8 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:33778:33778:0:0:0 | DELETION | DEL | chr19 | 41880650 | chr19 | 41880818 | CD79A | INTRON:3 | . | ARHGEF1 | INTERGENIC | . | . | MinSomaticScore | -168 | no | . | 1147,0 | 2880,24 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:35580:35580:11:5:0 | DELETION | DEL | chr19 | 57444387 | chr19 | 57445329 | ZNF749 | EXON:3 | . | ENSG00000276449 | INTERGENIC | . | . | PASS | -942 | no | . | 651,7 | 1000,4 | |
| 1136_7OO-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:37422:37422:34:0:0 | DELETION | DEL | chr22 | 22894175 | chr22 | 22894662 | IGLC1 | INTERGENIC | . | IGLJ2 | INTERGENIC | . | . | MinSomaticScore | -487 | no | . | 2558,80 | 3261,43 |
48 rows