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- Filename
- 869_HUS-T1-TDNA-1_A23WGJTLT4_2_vs_869_HUS-N1-BDNA-1_A23FG3YLT4_1.sv.hmnz.tsv
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- s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_dna/hmnz_cgp_dna_exp0034__70824045--20260606-020246/869_HUS-T1-TDNA-1_A23WGJTLT4_2_vs_869_HUS-N1-BDNA-1_A23FG3YLT4_1/variants/dna_fusions/869_HUS-T1-TDNA-1_A23WGJTLT4_2_vs_869_HUS-N1-BDNA-1_A23FG3YLT4_1.sv.hmnz.tsv
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- 6.4 KB
- Workflow Run
- hmnz-cgp-dna-exp0034-20260606-020246
- Published
- Jun 05, 2026 7:05 PM
Content
View in new tab| sample | sv_id | sv_type | svtype_standard | chr1 | pos1 | chr2 | pos2 | gene1 | region1 | strand1 | gene2 | region2 | strand2 | qual | filter | svlen | imprecise | tumor_gt | tumor_pr | tumor_sr | mate_id |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:52964:52964:0:0:0 | DELETION | DEL | chr1 | 51840327 | chr1 | 51840378 | NRDC | EXON:2 | . | MIR761 | INTERGENIC | . | . | PASS | -51 | no | . | 86,0 | 330,12 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:53475:53475:0:0:0 | DELETION | DEL | chr1 | 92074561 | chr1 | 92074633 | SETSIP | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -72 | no | . | 133,0 | 615,10 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:54753:54753:11:0:0 | DELETION | DEL | chr1 | 156866439 | chr1 | 156866547 | NTRK1 | INTRON:3 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -108 | no | . | 1254,0 | 3967,15 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:56017:56017:2:0:0 | DELETION | DEL | chr1 | 206480150 | chr1 | 206480245 | IKBKE | INTRON:12 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -95 | no | . | 102,0 | 394,28 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:20902:20902:65:1:0 | DELETION | DEL | chr2 | 29224308 | chr2 | 29224967 | ALK | INTRON:19 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -659 | no | . | 3366,19 | 4400,7 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:47415:47415:3:0:0 | DELETION | DEL | chr2 | 46297767 | chr2 | 46297988 | EPAS1 | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -221 | no | . | 1842,0 | 2945,16 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:48442:48442:4:1:0 | DELETION | DEL | chr2 | 108764979 | chr2 | 108765537 | RANBP2 | EXON:20 | . | INTERGENIC | INTERGENIC | . | . | PASS | -558 | no | . | 1842,68 | 3907,19 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:48469:48469:6:0:0 | DELETION | DEL | chr2 | 113217910 | chr2 | 113218025 | PAX8 | EXON:12 | . | PAX8-AS1 | GENE | . | . | MinSomaticScore | -115 | no | . | 1535,0 | 4747,11 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:49273:49276:1:0:0 | DELETION | DEL | chr2 | 178436492 | chr2 | 178450789 | PRKRA | INTRON:6 | . | CHROMR&PRKRA | GENE | . | . | MinSomaticScore | -14297 | yes | . | 131,17 | . | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:49276:49279:1:0:0 | DELETION | DEL | chr2 | 178441860 | chr2 | 178450862 | PRKRA | INTRON:5 | . | PJVK | INTERGENIC | . | . | MinSomaticScore | -9002 | yes | . | 185,34 | . | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:49705:49705:13:0:0 | DELETION | DEL | chr2 | 197419862 | chr2 | 197420011 | SF3B1 | INTRON:4 | . | INTERGENIC | INTERGENIC | . | . | PASS | -149 | no | . | 1527,0 | 3867,14 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:41588:41588:26:1:0 | DELETION | DEL | chr4 | 20253143 | chr4 | 20253558 | SLIT2 | INTERGENIC | . | INTERGENIC | INTERGENIC | . | . | PASS | -415 | no | . | 2752,195 | 4282,58 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:42843:42843:0:6:0 | DELETION | DEL | chr4 | 152535108 | chr4 | 152535940 | FBXW7 | EXON:1 | . | MIR4453HG | INTERGENIC | . | . | MinSomaticScore | -832 | no | . | 3372,9 | 4452,11 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:1895:0:0:13:4:0 | DELETION | DEL | chr5 | 23527214 | chr5 | 23527718 | PRDM9 | EXON:11 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -504 | no | . | 1478,39 | 3023,68 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:34958:34958:5:1:0 | DELETION | DEL | chr6 | 1610948 | chr6 | 1611568 | FOXC1 | EXON:1 | . | FOXCUT | INTERGENIC | . | . | MinSomaticScore | -620 | no | . | 2703,34 | 3540,22 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:60347:60347:11:3:0 | DELETION | DEL | chr8 | 37697751 | chr8 | 37698651 | ZNF703 | EXON:2 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -900 | no | . | 3294,5 | 3888,2 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:61762:61762:0:1:0 | DELETION | DEL | chr8 | 144881770 | chr8 | 144882442 | ZNF250 | EXON:6 | . | INTERGENIC | INTERGENIC | . | . | PASS | -672 | no | . | 1281,30 | 1857,3 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:58876:58876:8:0:0 | DELETION | DEL | chr9 | 127790255 | chr9 | 127790572 | CDK9 | EXON:7 | . | MIR3960 | INTERGENIC | . | . | MinSomaticScore | -317 | no | . | 2938,61 | 4152,27 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:7579:7579:23:2:0 | DELETION | DEL | chr11 | 64368649 | chr11 | 64369365 | RPS6KA4 | INTRON:12 | . | MIR1237&RPS6KA4 | GENE | . | . | PASS | -716 | no | . | 2289,16 | 2587,7 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:3856:3856:15:0:0 | DELETION | DEL | chr12 | 49051802 | chr12 | 49052279 | KMT2D | EXON:11 | . | INTERGENIC | INTERGENIC | . | . | PASS | -477 | no | . | 3121,189 | 3799,81 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:4216:4216:72:1:0 | DELETION | DEL | chr12 | 57630224 | chr12 | 57630555 | B4GALNT1 | INTRON:5 | . | ENSG00000287908 | INTERGENIC | . | . | PASS | -331 | no | . | 1668,57 | 2519,28 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:306:2:5:0:0:0 | DELETION | DEL | chr12 | 103980149 | chr12 | 103984643 | TDG | INTRON:4 | . | GLT8D2 | INTERGENIC | . | . | PASS | -4494 | yes | . | 172,15 | . | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:19312:19317:0:0:0 | DELETION | DEL | chr15 | 41561404 | chr15 | 41567251 | TYRO3 | INTRON:3 | . | ELOCP2 | INTERGENIC | . | . | MinSomaticScore | -5847 | yes | . | 380,21 | . | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:20533:20533:88:0:0 | DELETION | DEL | chr15 | 88117013 | chr15 | 88117164 | NTRK3 | INTRON:11 | . | INTERGENIC | INTERGENIC | . | . | PASS | -151 | no | . | 1637,0 | 3865,35 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:15978:15978:6:2:1 | DELETION | DEL | chr16 | 352962 | chr16 | 353097 | AXIN1 | INTERGENIC | . | AXIN1-MRPL28 | INTERGENIC | . | . | MinSomaticScore | -135 | no | . | 187,0 | 542,26 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:18741:18741:0:5:0 | DELETION | DEL | chr16 | 89299367 | chr16 | 89299961 | ENSG00000260279 | INTERGENIC | . | ANKRD11 | INTRON:4 | . | . | PASS | -594 | no | . | 3264,78 | 2046,41 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:15034:15034:10:0:0 | DELETION | DEL | chr17 | 61681581 | chr17 | 61682244 | BRIP1 | EXON:20 | . | INTERGENIC | INTERGENIC | . | . | PASS | -663 | no | . | 2082,52 | 2589,19 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:23396:23396:1:1:0 | INSERTION | INS | chr19 | 5131563 | chr19 | 5131563 | KDM4B | INTRON:12 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | 82 | no | . | 1,0 | 187,26 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDUP:TANDEM:0:25574:25576:0:0:0 | DUPLICATION | DUP | chr19 | 39878213 | chr19 | 39894132 | FCGBP | EXON:13 | . | INTERGENIC | INTERGENIC | . | . | PASS | 15919 | yes | . | 2063,37 | . | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:26909:26909:0:3:0 | DELETION | DEL | chr19 | 52415716 | chr19 | 52416304 | ZNF528 | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -588 | no | . | 569,26 | 657,17 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:28654:28654:38:2:0 | DELETION | DEL | chr22 | 22890289 | chr22 | 22890573 | IGLJ1 | INTERGENIC | . | IGLC1 | INTERGENIC | . | . | MinSomaticScore | -284 | no | . | 902,3 | 579,58 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:28654:28654:37:0:0 | DELETION | DEL | chr22 | 22890289 | chr22 | 22890577 | IGLJ1 | INTERGENIC | . | IGLC1 | INTERGENIC | . | . | MinSomaticScore | -288 | no | . | 897,10 | 572,74 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:29853:29853:11:0:0 | DELETION | DEL | chr22 | 50504016 | chr22 | 50504280 | NCAPH2 | INTERGENIC | . | LMF2 | INTRON:12 | . | . | MinSomaticScore | -264 | no | . | 152,0 | 238,9 | |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:174:175:0:0:0:0 | TRANSLOCATION | BND | chrX | 7843996 | chrX | 8169902 | ENSG00000285679&VCX | EXON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 698,9 | . | MantaBND:0:174:175:0:0:0:1 |
| 869_HUS-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:174:175:0:0:0:1 | TRANSLOCATION | BND | chrX | 8169902 | chrX | 7843996 | ENSG00000285679&VCX | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 698,9 | . | MantaBND:0:174:175:0:0:0:0 |
36 rows