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- Filename
- 1136_814-T1-TDNA-1_A23WGJTLT4_3_vs_1136_814-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
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- s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_dna/hmnz_cgp_dna_exp0034__70824045--20260606-020246/1136_814-T1-TDNA-1_A23WGJTLT4_3_vs_1136_814-N1-BDNA-1_A237CFYLT3_1/variants/dna_fusions/1136_814-T1-TDNA-1_A23WGJTLT4_3_vs_1136_814-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
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- Workflow Run
- hmnz-cgp-dna-exp0034-20260606-020246
- Published
- Jun 05, 2026 7:05 PM
Content
View in new tab| sample | sv_id | sv_type | svtype_standard | chr1 | pos1 | chr2 | pos2 | gene1 | region1 | strand1 | gene2 | region2 | strand2 | qual | filter | svlen | imprecise | tumor_gt | tumor_pr | tumor_sr | mate_id |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:71351:71351:1:2:0 | DELETION | DEL | chr1 | 46247394 | chr1 | 46247541 | RAD54L | INTERGENIC | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -147 | no | . | 280,0 | 1427,35 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:72565:72565:8:1:0 | DELETION | DEL | chr1 | 109924006 | chr1 | 109924233 | CSF1 | EXON:6 | . | INTERGENIC | INTERGENIC | . | . | PASS | -227 | no | . | 1511,0 | 2704,16 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:73422:73422:5:0:0 | DELETION | DEL | chr1 | 152303797 | chr1 | 152308268 | FLG | EXON:3 | . | FLG-AS1 | GENE | . | . | MinSomaticScore | -4471 | yes | . | 1552,13 | . | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:74009:74009:12:0:0 | DELETION | DEL | chr1 | 156866439 | chr1 | 156866547 | NTRK1 | INTRON:3 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -108 | no | . | 1161,0 | 3800,13 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:74011:74011:36:1:0 | DELETION | DEL | chr1 | 156874889 | chr1 | 156875588 | NTRK1 | INTRON:11 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -699 | no | . | 3045,40 | 4101,5 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:75158:75158:4:0:0 | DELETION | DEL | chr1 | 186307199 | chr1 | 186307904 | PRG4 | EXON:7 | . | TPR | INTERGENIC | . | . | MinSomaticScore | -705 | no | . | 2248,13 | 2987,35 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:66532:66532:0:0:0 | DELETION | DEL | chr2 | 177264213 | chr2 | 177264348 | ENSG00000222043 | INTERGENIC | . | NFE2L2 | INTRON:1 | . | . | PASS | -135 | no | . | 943,0 | 2398,18 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:67159:67159:16:0:0 | DELETION | DEL | chr2 | 197419862 | chr2 | 197420011 | SF3B1 | INTRON:4 | . | INTERGENIC | INTERGENIC | . | . | PASS | -149 | no | . | 1378,0 | 3651,19 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:58376:58376:17:4:0 | DELETION | DEL | chr3 | 12595110 | chr3 | 12595918 | RAF1 | INTRON:11 | . | INTERGENIC | INTERGENIC | . | . | PASS | -808 | no | . | 1779,31 | 2075,16 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:56017:56017:2:0:0 | DELETION | DEL | chr4 | 39446389 | chr4 | 39446548 | KLB | EXON:4 | . | Y_RNA | INTERGENIC | . | . | PASS | -159 | no | . | 496,0 | 1271,19 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:2162:0:1:0:0:0 | DELETION | DEL | chr4 | 163166413 | chr4 | 163166542 | NAF1 | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -129 | no | . | 394,0 | 1122,9 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:58133:58133:3:0:0 | DELETION | DEL | chr4 | 186726507 | chr4 | 186726673 | FAT1 | INTERGENIC | . | INTERGENIC | INTERGENIC | . | . | PASS | -166 | no | . | 1645,0 | 3551,44 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:1834:0:1:0:0:0 | DELETION | DEL | chr5 | 767084 | chr5 | 878219 | BRD9&BRD9P2&ENSG00000285522&ENSG00000288930&SPCS2P3&ZDHHC11&ZDHHC11B | GENE | . | ZDHHC11 | EXON:8 | . | . | MinSomaticScore | -111135 | yes | . | 280,8 | . | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:48026:48026:1:6:0 | DELETION | DEL | chr6 | 31026759 | chr6 | 31027464 | MUC22 | EXON:2 | . | INTERGENIC | INTERGENIC | . | . | PASS | -705 | no | . | 1480,32 | 1719,2 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaBND:0:48563:48564:3:0:0:0 | TRANSLOCATION | BND | chr6 | 32584353 | chr6_GL000251V2_ALT | 3939353 | HLA-DRB1 | GENE | - | INTERGENIC | INTERGENIC | + | . | MinSomaticScore | 0 | yes | . | 616,8 | . | MantaBND:0:48563:48564:3:0:0:1 |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:50432:50432:29:0:0 | DELETION | DEL | chr6 | 106105341 | chr6 | 106105524 | PRDM1 | EXON:5 | . | ENSG00000269919 | INTERGENIC | . | . | MinSomaticScore | -183 | no | . | 1887,0 | 3985,16 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:51456:51456:1:0:0 | DELETION | DEL | chr6 | 152125430 | chr6 | 152125975 | SYNE1 | INTRON:145 | . | ESR1 | GENE | . | . | MinSomaticScore | -545 | no | . | 2617,56 | 3545,27 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:45241:45241:79:5:0 | DELETION | DEL | chr7 | 101041310 | chr7 | 101042018 | MUC17 | EXON:3 | . | INTERGENIC | INTERGENIC | . | . | PASS | -708 | no | . | 1514,43 | 2080,14 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:80966:80966:12:0:0 | DELETION | DEL | chr8 | 11758538 | chr8 | 11758841 | GATA4 | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | PASS | -303 | no | . | 2177,29 | 3802,59 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:81613:81613:10:2:0 | DELETION | DEL | chr8 | 37698107 | chr8 | 37698771 | ZNF703 | EXON:2 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -664 | no | . | 2948,47 | 3878,27 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:81741:81741:37:7:0 | DELETION | DEL | chr8 | 38434216 | chr8 | 38434902 | FGFR1&RPS20P22 | GENE | . | RPS20P22 | EXON:1 | . | . | MinSomaticScore | -686 | no | . | 1847,41 | 2278,11 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:82168:82168:1:2:0 | DELETION | DEL | chr8 | 55879919 | chr8 | 55880162 | LYN | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -243 | no | . | 1691,0 | 2731,13 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:79630:79630:16:8:0 | DELETION | DEL | chr9 | 127790255 | chr9 | 127790572 | CDK9 | EXON:7 | . | MIR3960 | INTERGENIC | . | . | PASS | -317 | no | . | 2599,50 | 3611,33 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:8930:8930:26:4:0 | DELETION | DEL | chr11 | 1245129 | chr11 | 1245960 | MUC5B | EXON:31 | . | MUC5B-AS1 | EXON:1 | . | . | MinSomaticScore | -831 | no | . | 1571,17 | 2983,13 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:8930:8930:65:1:0 | DELETION | DEL | chr11 | 1250018 | chr11 | 1250615 | MUC5B | EXON:31 | . | MUC5B-AS1 | INTERGENIC | . | . | MinSomaticScore | -597 | no | . | 1440,82 | 2281,14 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:8930:8930:74:2:0 | DELETION | DEL | chr11 | 1250492 | chr11 | 1251176 | MUC5B | EXON:31 | . | MUC5B-AS1 | INTERGENIC | . | . | MinSomaticScore | -684 | no | . | 1679,27 | 2137,20 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:9491:9491:0:0:0 | DELETION | DEL | chr11 | 1584915 | chr11 | 1585035 | KRTAP5-1 | EXON:1 | . | KRTAP5-AS1 | EXON:1 | . | . | MinSomaticScore | -120 | no | . | 468,0 | 1117,12 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:11163:11163:125:0:0 | DELETION | DEL | chr11 | 62522666 | chr11 | 62523272 | AHNAK | EXON:5 | . | INTERGENIC | INTERGENIC | . | . | PASS | -606 | no | . | 1414,70 | 2046,4 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:11163:11163:37:1:0 | DELETION | DEL | chr11 | 62525432 | chr11 | 62526200 | AHNAK | EXON:5 | . | INTERGENIC | INTERGENIC | . | . | PASS | -768 | no | . | 1632,19 | 1736,33 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:12759:12759:12:1:0 | DELETION | DEL | chr11 | 101129006 | chr11 | 101129221 | PGR&PGR-AS1 | GENE | . | PGR | EXON:1 | . | . | PASS | -215 | no | . | 1945,0 | 3817,21 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:13190:13190:13:0:0 | DELETION | DEL | chr11 | 118488676 | chr11 | 118488792 | KMT2A | EXON:11 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -116 | no | . | 731,0 | 2153,20 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:5070:5070:6:1:0 | DELETION | DEL | chr12 | 281926 | chr12 | 282042 | KDM5A | EXON:28 | . | ENSG00000261799 | INTERGENIC | . | . | MinSomaticScore | -116 | no | . | 1100,0 | 1968,20 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:6338:6338:6:0:0 | DELETION | DEL | chr12 | 40480872 | chr12 | 40484056 | MUC19 | EXON:56 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -3184 | yes | . | 542,22 | . | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:250:0:1:0:1:0 | DELETION | DEL | chr12 | 48776339 | chr12 | 48776533 | ADCY6 | EXON:7 | . | MIR4701 | INTERGENIC | . | . | MinSomaticScore | -194 | no | . | 666,0 | 1313,12 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:6448:6448:10:3:0 | DELETION | DEL | chr12 | 49051255 | chr12 | 49051309 | KMT2D | EXON:11 | . | INTERGENIC | INTERGENIC | . | . | PASS | -54 | no | . | 617,0 | 2970,17 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:6448:6448:4:8:2 | DELETION | DEL | chr12 | 49051838 | chr12 | 49052342 | KMT2D | EXON:11 | . | INTERGENIC | INTERGENIC | . | . | PASS | -504 | no | . | 2213,186 | 3999,33 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:6953:6953:6:0:0 | DELETION | DEL | chr12 | 57624593 | chr12 | 57624704 | ENSG00000287908 | EXON:17 | . | B4GALNT1 | EXON:11 | . | . | MinSomaticScore | -111 | no | . | 1252,0 | 3917,15 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:4827:4827:15:4:0 | DELETION | DEL | chr13 | 109783937 | chr13 | 109784449 | IRS2 | EXON:1 | . | ENSG00000275741 | INTERGENIC | . | . | PASS | -512 | no | . | 2955,93 | 3816,18 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:29337:29337:1:2:0 | DELETION | DEL | chr14 | 23321521 | chr14 | 23321715 | PABPN1 | EXON:1 | . | BCL2L2-PABPN1 | INTRON:4 | . | . | MinSomaticScore | -194 | no | . | 574,0 | 1143,12 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:31197:31197:1:0:0 | DELETION | DEL | chr14 | 104769485 | chr14 | 104769785 | ENSG00000258430 | EXON:2 | . | AKT1 | EXON:15 | . | . | PASS | -300 | no | . | 2555,22 | 3939,17 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:31245:31245:7:0:0 | DELETION | DEL | chr14 | 105492192 | chr14 | 105492409 | ENSG00000257341&TEDC1 | GENE | . | TEDC1 | EXON:3 | . | . | PASS | -217 | no | . | 422,0 | 649,10 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:22747:22747:26:1:0 | DELETION | DEL | chr16 | 2598003 | chr16 | 2598168 | PDPK1 | EXON:14 | . | ENSG00000279162 | INTERGENIC | . | . | PASS | -165 | no | . | 1680,0 | 4296,26 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:22935:22935:3:4:0 | DELETION | DEL | chr16 | 3879939 | chr16 | 3880225 | CREBBP | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | PASS | -286 | no | . | 1730,3 | 2919,24 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:21643:21643:7:1:0 | DELETION | DEL | chr17 | 76736752 | chr17 | 76737447 | SRSF2 | EXON:1 | . | MFSD11&SRSF2 | GENE | . | . | MinSomaticScore | -695 | no | . | 1748,25 | 1847,34 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:33540:33540:1:2:0 | DELETION | DEL | chr19 | 16325217 | chr19 | 16325833 | KLF2 | EXON:2 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -616 | no | . | 2773,51 | 3624,12 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:34455:34455:5:1:0 | DELETION | DEL | chr19 | 37185698 | chr19 | 37186370 | ZNF585B | EXON:5 | . | ENSG00000267360 | INTRON:1 | . | . | MinSomaticScore | -672 | no | . | 888,19 | 1332,6 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:35043:35043:0:0:0 | DELETION | DEL | chr19 | 41880650 | chr19 | 41880818 | CD79A | INTRON:3 | . | ARHGEF1 | INTERGENIC | . | . | MinSomaticScore | -168 | no | . | 1092,0 | 2710,30 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:35671:35671:1:1:0 | DELETION | DEL | chr19 | 47802329 | chr19 | 47802437 | TPRX1 | EXON:4 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -108 | no | . | 859,0 | 2296,16 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:36120:36120:15:0:0 | DELETION | DEL | chr19 | 50417135 | chr19 | 50417966 | POLD1 | INTRON:26 | . | ENSG00000142539 | INTRON:5 | . | . | MinSomaticScore | -831 | no | . | 1814,6 | 2153,9 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaBND:0:36490:36496:1:0:0:1 | TRANSLOCATION | BND | chr19 | 54220679 | chr19 | 54575669 | LILRA2&LILRB3 | EXON:6 | + | LILRA2&RPS9 | GENE | - | . | MinSomaticScore | 0 | yes | . | 1518,8 | . | MantaBND:0:36490:36496:1:0:0:0 |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaBND:0:36490:36496:0:0:0:1 | TRANSLOCATION | BND | chr19 | 54221444 | chr19 | 54575073 | LILRA2&LILRB3 | INTRON:4 | + | LILRA2&RPS9 | GENE | - | . | MinSomaticScore | 0 | yes | . | 1025,8 | . | MantaBND:0:36490:36496:0:0:0:0 |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaBND:0:36490:36496:0:0:0:0 | TRANSLOCATION | BND | chr19 | 54575073 | chr19 | 54221444 | LILRA2&LILRB3 | INTRON:5 | + | LILRA2&RPS9 | INTRON:5 | - | . | MinSomaticScore | 0 | yes | . | 1025,8 | . | MantaBND:0:36490:36496:0:0:0:1 |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaBND:0:36490:36496:1:0:0:0 | TRANSLOCATION | BND | chr19 | 54575669 | chr19 | 54220679 | LILRA2&LILRB3 | INTRON:6 | + | LILRA2&RPS9 | INTRON:6 | - | . | MinSomaticScore | 0 | yes | . | 1518,8 | . | MantaBND:0:36490:36496:1:0:0:1 |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:36814:36814:1:0:0 | DELETION | DEL | chr19 | 56384124 | chr19 | 56384796 | ZNF582 | EXON:5 | . | ENSG00000267192 | INTERGENIC | . | . | MinSomaticScore | -672 | no | . | 873,22 | 1155,5 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:36895:36895:16:0:0 | DELETION | DEL | chr19 | 57606468 | chr19 | 57607140 | ZNF530 | EXON:3 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -672 | no | . | 1125,47 | 1194,20 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:40537:40537:2:7:0 | DELETION | DEL | chr20 | 9580099 | chr20 | 9580890 | PAK5 | EXON:4 | . | ENSG00000232738 | INTERGENIC | . | . | MinSomaticScore | -791 | no | . | 1687,18 | 2221,2 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:40787:40787:0:0:0 | DELETION | DEL | chr20 | 21511894 | chr20 | 21512155 | NKX2-2 | EXON:2 | . | NKX2-2-AS1 | EXON:2 | . | . | PASS | -261 | no | . | 799,0 | 1307,12 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:1323:0:0:2:0:0 | DELETION | DEL | chr20 | 25675320 | chr20 | 25676160 | ZNF337 | EXON:5 | . | MED28P7 | INTERGENIC | . | . | MinSomaticScore | -840 | no | . | 873,9 | 879,12 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:42678:42678:13:8:0 | DELETION | DEL | chr21 | 41493621 | chr21 | 41494505 | TMPRSS2 | EXON:3 | . | INTERGENIC | INTERGENIC | . | . | PASS | -884 | no | . | 2765,12 | 3655,7 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:38628:38628:36:1:0 | DELETION | DEL | chr22 | 22890289 | chr22 | 22890575 | IGLJ1 | INTERGENIC | . | IGLC1 | INTERGENIC | . | . | MinSomaticScore | -286 | no | . | 1086,3 | 717,91 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaDEL:0:38626:38626:23:0:0 | DELETION | DEL | chr22 | 22894175 | chr22 | 22894662 | IGLC1 | INTERGENIC | . | IGLJ2 | INTERGENIC | . | . | MinSomaticScore | -487 | no | . | 2767,99 | 3260,63 | |
| 1136_814-T1-TDNA-1_A23WGJTLT4_3 | MantaBND:0:48563:48564:3:0:0:1 | TRANSLOCATION | BND | chr6_GL000251v2_alt | 3939353 | chr6 | 32584353 | INTERGENIC | INTERGENIC | - | HLA-DRB1 | GENE | - | . | MinSomaticScore | 0 | yes | . | 616,8 | . | MantaBND:0:48563:48564:3:0:0:0 |
63 rows