.command.log - Workdir - NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1136_7L-N1-BDNA-1_A23WGJTLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/3f12dcb1438ecf924200583c8343f0/.command.log
Size: 785 bytes
Task: NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1136_7L-N1-BDNA-1_A23WGJTLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/3f12dcb1438ecf924200583c8343f0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-4eb95eab-fae6-42b1-9e7f-76da3ab8c895/a5/03c67a517d495c643c540de18d3053/FINAL_hotspot_list_07302025_hg38_sorted_w_anno_mods.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/84a1b5cb9971cb451063bfe5f8864c/1136_7L-N1-BDNA-1_A23WGJTLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.tnseq.hmnz.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/3f12dcb1438ecf924200583c8343f0/.command.run
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot regions from FINAL_hotspot_list_07302025_hg38_sorted_w_anno_mods.bed
Filtered: 270 PASS variants → 0 hotspot variants (0 unique)