.command.log - Workdir - NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1136_6I8-T1-TDNA-1_A23WJ5GLT4_2_vs_1136_6I8-N1-BDNA-1_B23MHTGLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/7fdb0f86b167eb2a8abef754c38135/.command.log
Size: 819 bytes
Task: NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1136_6I8-T1-TDNA-1_A23WJ5GLT4_2_vs_1136_6I8-N1-BDNA-1_B23MHTGLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/b8fa96402ab81d8696fcd73ca26f29/1136_6I8-T1-TDNA-1_A23WJ5GLT4_2_vs_1136_6I8-N1-BDNA-1_B23MHTGLT4_1.tnseq.hmnz.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-02a7a0a2-75c7-4a9f-81d6-141deaf746e1/05/276485ce98c8d6e32e900e5b62d456/FINAL_hotspot_list_07302025_hg38_sorted_w_anno_mods.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/7fdb0f86b167eb2a8abef754c38135/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/7fdb0f86b167eb2a8abef754c38135/.command.run
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot regions from FINAL_hotspot_list_07302025_hg38_sorted_w_anno_mods.bed
Detected annotation format: CSQ
Filtered: 426 PASS variants → 2 hotspot variants (2 unique)