File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/9bddda1b65da4a9558ce63d09935cc/.command.log
Size
833 bytes
Task
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (FFPE_HD789_01_p2_gDNA_03_A23WJ5GLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-02a7a0a2-75c7-4a9f-81d6-141deaf746e1/05/276485ce98c8d6e32e900e5b62d456/FINAL_hotspot_list_07302025_hg38_sorted_w_anno_mods.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/9bddda1b65da4a9558ce63d09935cc/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/00/ae49834101770927d847d321b3e170/FFPE_HD789_01_p2_gDNA_03_A23WJ5GLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.tnseq.hmnz.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/9bddda1b65da4a9558ce63d09935cc/.command.run
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot regions from FINAL_hotspot_list_07302025_hg38_sorted_w_anno_mods.bed
Detected annotation format: CSQ
Filtered: 58604 PASS variants → 6 hotspot variants (6 unique)