Error executing process > 'NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1166b_CA7)'

Caused by:
  Process `NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1166b_CA7)` terminated with an error exit status (143)


Command executed:

  vep \
      -i 1166b_CA7_cnv_lifted_sorted.vcf.gz \
      -o 1166b_CA7_cnv_vep.vcf.gz \
      --offline --vcf --symbol --biotype --gene_phenotype --regulatory --canonical --check_existing \
      --compress_output bgzip \
      --fasta Homo_sapiens_assembly38.fasta \
      --assembly GRCh38 \
      --species homo_sapiens \
      --cache \
      --cache_version 110 \
      --dir_cache ${PWD}/110_GRCh38 \
      --fork 4
  
  tabix  1166b_CA7_cnv_vep.vcf.gz
  
  cat <<-END_VERSIONS > versions.yml
  "NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP":
      ensemblvep: $( echo $(vep --help 2>&1) | sed 's/^.*Versions:.*ensembl-vep : //;s/ .*$//')
      tabix: $(echo $(tabix -h 2>&1) | sed 's/^.*Version: //; s/ .*$//')
  END_VERSIONS

Command exit status:
  143

Command output:
  (empty)

Work dir:
  s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/e9110b8a6a831ad6d286ccda037fa9

Container:
  community.wave.seqera.io/library/ensembl-vep:115.2--90ec797ecb088e9a

Tip: when you have fixed the problem you can continue the execution adding the option `-resume` to the run command line