File Info

Filename
Index_Hopping_Counts.csv
Full Path
s3://natera-platform-sandbox/users/pgrauman/daq-outputs/20251223_LH00166_0225_A237FK3LT3/output/bclconvert/L005/output/Reports/Index_Hopping_Counts.csv
Size
3.0 KB
Workflow Run
lcvs-exp2-1
Published
Jan 30, 2026 12:14 PM

Content

View in new tab
Lane SampleID index index2 # Reads % of Hopped Reads % of All Reads
5 52941-ND0952_fetal GTTGTTCG CCAACTTC 184617518 0.116784
5 fetal_AF_40 CGGTTGTT GTGGTATG 181132986 0.114580
5 fetal_AF_20 ACTGAGGT GTCAACAG 186101070 0.117723
5 fetal_AF_10 TGAAGACG ACATGCCA 186080767 0.117710
5 fetal_AF_5 GTTACGCA ATGGCGAT 184440253 0.116672
5 fetal_AF_2_5 AGCGTGTT CTTCGCAA 223840229 0.141596
5 fetal_AF_1_25 GATCGAGT GACGAACT 178573415 0.112961
5 52943-ND0958_maternal ACAGCTCA TACTGCTC 196934656 0.124576
5 GTTGTTCG GTGGTATG 55800 0.012596 0.000035
5 GTTGTTCG GTCAACAG 64741 0.014615 0.000041
5 GTTGTTCG ACATGCCA 75123 0.016958 0.000048
5 GTTGTTCG ATGGCGAT 86128 0.019443 0.000054
5 GTTGTTCG CTTCGCAA 64296 0.014514 0.000041
5 GTTGTTCG GACGAACT 60804 0.013726 0.000038
5 GTTGTTCG TACTGCTC 68708 0.015510 0.000043
5 CGGTTGTT CCAACTTC 77754 0.017552 0.000049
5 CGGTTGTT GTCAACAG 84085 0.018981 0.000053
5 CGGTTGTT ACATGCCA 80661 0.018209 0.000051
5 CGGTTGTT ATGGCGAT 80809 0.018242 0.000051
5 CGGTTGTT CTTCGCAA 96462 0.021775 0.000061
5 CGGTTGTT GACGAACT 68902 0.015554 0.000044
5 CGGTTGTT TACTGCTC 65899 0.014876 0.000042
5 ACTGAGGT CCAACTTC 69456 0.015679 0.000044
5 ACTGAGGT GTGGTATG 74510 0.016820 0.000047
5 ACTGAGGT ACATGCCA 71755 0.016198 0.000045
5 ACTGAGGT ATGGCGAT 77285 0.017446 0.000049
5 ACTGAGGT CTTCGCAA 71629 0.016170 0.000045
5 ACTGAGGT GACGAACT 74560 0.016831 0.000047
5 ACTGAGGT TACTGCTC 67916 0.015331 0.000043
5 TGAAGACG CCAACTTC 66688 0.015054 0.000042
5 TGAAGACG GTGGTATG 50915 0.011494 0.000032
5 TGAAGACG GTCAACAG 55784 0.012593 0.000035
5 TGAAGACG ATGGCGAT 69931 0.015786 0.000044
5 TGAAGACG CTTCGCAA 57263 0.012927 0.000036
5 TGAAGACG GACGAACT 50805 0.011469 0.000032
5 TGAAGACG TACTGCTC 59694 0.013475 0.000038
5 GTTACGCA CCAACTTC 463474 0.104625 0.000293
5 GTTACGCA GTGGTATG 63164 0.014259 0.000040
5 GTTACGCA GTCAACAG 65407 0.014765 0.000041
5 GTTACGCA ACATGCCA 72689 0.016409 0.000046
5 GTTACGCA CTTCGCAA 64709 0.014607 0.000041
5 GTTACGCA GACGAACT 59651 0.013466 0.000038
5 GTTACGCA TACTGCTC 70821 0.015987 0.000045
5 AGCGTGTT CCAACTTC 92392 0.020857 0.000058
5 AGCGTGTT GTGGTATG 99787 0.022526 0.000063
5 AGCGTGTT GTCAACAG 97121 0.021924 0.000061
5 AGCGTGTT ACATGCCA 86146 0.019447 0.000054
5 AGCGTGTT ATGGCGAT 91305 0.020611 0.000058
5 AGCGTGTT GACGAACT 68890 0.015551 0.000044
5 AGCGTGTT TACTGCTC 79375 0.017918 0.000050
5 GATCGAGT CCAACTTC 68357 0.015431 0.000043
5 GATCGAGT GTGGTATG 70403 0.015893 0.000045
5 GATCGAGT GTCAACAG 83625 0.018878 0.000053
5 GATCGAGT ACATGCCA 71117 0.016054 0.000045
5 GATCGAGT ATGGCGAT 82952 0.018726 0.000052
5 GATCGAGT CTTCGCAA 63759 0.014393 0.000040
5 GATCGAGT TACTGCTC 68905 0.015555 0.000044
5 ACAGCTCA CCAACTTC 131616 0.029711 0.000083
5 ACAGCTCA GTGGTATG 52101 0.011761 0.000033
5 ACAGCTCA GTCAACAG 63027 0.014228 0.000040
5 ACAGCTCA ACATGCCA 68982 0.015572 0.000044
5 ACAGCTCA ATGGCGAT 66402 0.014990 0.000042
5 ACAGCTCA CTTCGCAA 63179 0.014262 0.000040
5 ACAGCTCA GACGAACT 52129 0.011768 0.000033
65 rows