File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/users/pgrauman/daq-outputs/20251223_LH00166_0225_A237FK3LT3/output/bclconvert/L007/output/Reports/Quality_Metrics.csv
- Size
- 1.6 KB
- Workflow Run
- lcvs-exp2-1
- Published
- Jan 30, 2026 12:15 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 7 | 52941-ND0952_fetal | GTTGTTCG | CCAACTTC | 1 | 25721722224 | 24375343256 | 1001172688991 | 38.92 | 0.95 |
| 7 | 52941-ND0952_fetal | GTTGTTCG | CCAACTTC | 2 | 25721722224 | 24182226661 | 996212165635 | 38.73 | 0.94 |
| 7 | fetal_AF_40 | CGGTTGTT | GTGGTATG | 1 | 25465216464 | 24136752159 | 991328999475 | 38.93 | 0.95 |
| 7 | fetal_AF_40 | CGGTTGTT | GTGGTATG | 2 | 25465216464 | 23984553044 | 987163676687 | 38.77 | 0.94 |
| 7 | fetal_AF_20 | ACTGAGGT | GTCAACAG | 1 | 26256151440 | 24871626713 | 1021639275299 | 38.91 | 0.95 |
| 7 | fetal_AF_20 | ACTGAGGT | GTCAACAG | 2 | 26256151440 | 24764231024 | 1018550685719 | 38.79 | 0.94 |
| 7 | fetal_AF_10 | TGAAGACG | ACATGCCA | 1 | 25909709472 | 24578993445 | 1009000308942 | 38.94 | 0.95 |
| 7 | fetal_AF_10 | TGAAGACG | ACATGCCA | 2 | 25909709472 | 24385907966 | 1004021513480 | 38.75 | 0.94 |
| 7 | fetal_AF_5 | GTTACGCA | ATGGCGAT | 1 | 25691036256 | 24337892737 | 999850804825 | 38.92 | 0.95 |
| 7 | fetal_AF_5 | GTTACGCA | ATGGCGAT | 2 | 25691036256 | 24157732480 | 995023084165 | 38.73 | 0.94 |
| 7 | fetal_AF_2_5 | AGCGTGTT | CTTCGCAA | 1 | 31851319680 | 30137044708 | 1238576669356 | 38.89 | 0.95 |
| 7 | fetal_AF_2_5 | AGCGTGTT | CTTCGCAA | 2 | 31851319680 | 30010351259 | 1234811602853 | 38.77 | 0.94 |
| 7 | fetal_AF_1_25 | GATCGAGT | GACGAACT | 1 | 25363728000 | 24034292831 | 987069797129 | 38.92 | 0.95 |
| 7 | fetal_AF_1_25 | GATCGAGT | GACGAACT | 2 | 25363728000 | 23905050309 | 983504396592 | 38.78 | 0.94 |
| 7 | 52943-ND0958_maternal | ACAGCTCA | TACTGCTC | 1 | 27588638448 | 26124316606 | 1073266988296 | 38.90 | 0.95 |
| 7 | 52943-ND0958_maternal | ACAGCTCA | TACTGCTC | 2 | 27588638448 | 25959535475 | 1068715920242 | 38.74 | 0.94 |
| 7 | Undetermined | 1 | 8345186928 | 5078019488 | 255035980841 | 30.56 | 0.61 | ||
| 7 | Undetermined | 2 | 8345186928 | 5028776088 | 250050055395 | 29.96 | 0.60 |
19 rows