fetal_AF_10_basic_stats.tsv - Workflow Tracker

Filename: fetal_AF_10_basic_stats.tsv
Full Path: s3://natera-platform-sandbox/users/pgrauman/daq-outputs/20251223_LH00166_0225_A237FK3LT3/output/qc/fetal_AF_10_basic_stats.tsv
Size: 1.4 KB
Workflow Run: lcvs-exp2-1
Published: Jan 30, 2026 3:37 PM

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
fetal_AF_10.md	2919108206	7749157	0.002655	699790978	0.760272	345972433	0.644769	0.344158	0.731989	0.268011	155	172	191	261726101	0.756494	191580601	70145500	451203313	240838508	175.884646	23.82509	2219317228	0.984192	0.94979	0.94979	419235703056	xgen-exome-research-panel-v2-targets-hg38.bed	932994	0.09547	0.0	0.368243	0.236748	0.582217	0.699852	0.734472	0.80924	0.896406	0.943214	1.006647	1.072283	1.096556	1.124903	1.082116	1.079423	0.951575	0.689327	0.378979	0.0	0.169382	0.0	748.448928	0.168769	21541.0	301.0	437.0	749.0	966.0	1549.0	0.002407	0.366375	33914467	33870215	0.998897	0.997593	33951930	0.1214	5549	-198018.933	119461.3324	34156490

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