|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
6s |
4s |
0s |
1s |
0 bytes |
94% |
128.3 KB |
58.6 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
47s |
15s |
0s |
31s |
19.3 MB |
97% |
19.8 MB |
266.0 KB |
108.0 KB |
172.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_BC1I-N1-BDNA-1_B23L5TMLT4_1)
|
12s |
2s |
6s |
4s |
305.0 MB |
366% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1)
|
11s |
2s |
5s |
4s |
251.7 MB |
351% |
96.8 MB |
1.8 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_LMJ-N1-BDNA-1_B23MHTGLT4_1)
|
22s |
15s |
5s |
2s |
278.2 MB |
369% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_MYO-N1-BDNA-1_B23MHTGLT4_1)
|
9s |
2s |
4s |
3s |
339.4 MB |
359% |
97.1 MB |
2.1 MB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_QZ1-N1-BDNA-1_B23KFG5LT4_1)
|
6s |
1s |
2s |
3s |
285.8 MB |
391% |
97.0 MB |
1.8 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_2VD-N1-BDNA-1_A23KFG7LT4_1)
|
8s |
2s |
4s |
2s |
511.3 MB |
387% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_3Q5-N1-BDNA-1_B23MHTGLT4_1)
|
19s |
14s |
3s |
2s |
257.5 MB |
389% |
97.0 MB |
1.8 MB |
16.0 KB |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_3ZV-N1-BDNA-1_B23MHTGLT4_1)
|
9s |
3s |
4s |
2s |
320.5 MB |
363% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_43A-N1-BDNA-1_A23KFG7LT4_1)
|
9s |
2s |
5s |
2s |
322.3 MB |
387% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_4UT-N1-BDNA-1_B23MHTGLT4_1)
|
18s |
11s |
5s |
2s |
330.2 MB |
353% |
96.9 MB |
1.8 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_5MS-N1-BDNA-1_B23KFG5LT4_1)
|
10s |
3s |
5s |
2s |
342.3 MB |
359% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_5WB-N1-BDNA-1_B23KFG5LT4_1)
|
24s |
17s |
5s |
2s |
333.9 MB |
380% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_6I8-N1-BDNA-1_B23MHTGLT4_1)
|
25s |
18s |
5s |
2s |
325.5 MB |
395% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_85O-N1-BDNA-1_B23KGCJLT4_1)
|
23s |
18s |
3s |
2s |
290.1 MB |
403% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (1029_BC1I-N1-BDNA-1_B23L5TMLT4_1)
|
21s |
3s |
15s |
3s |
468.2 MB |
216% |
127.7 MB |
37.2 MB |
0 bytes |
37.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1)
|
34s |
21s |
9s |
4s |
611.1 MB |
209% |
140.6 MB |
52.0 MB |
0 bytes |
52.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (1029_LMJ-N1-BDNA-1_B23MHTGLT4_1)
|
25s |
10s |
12s |
3s |
510.4 MB |
216% |
127.6 MB |
37.3 MB |
0 bytes |
37.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (1029_MYO-N1-BDNA-1_B23MHTGLT4_1)
|
17s |
2s |
12s |
3s |
503.7 MB |
207% |
126.8 MB |
36.5 MB |
0 bytes |
36.5 MB |
1 |