|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
6s |
4s |
0s |
1s |
0 bytes |
98% |
129.6 KB |
58.6 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
34s |
2s |
0s |
31s |
16.6 MB |
97% |
19.7 MB |
265.9 KB |
108.0 KB |
172.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_BC1I-N1-BDNA-1_B23L5TMLT4_1)
|
9s |
3s |
4s |
2s |
342.0 MB |
353% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1)
|
9s |
2s |
4s |
3s |
324.3 MB |
378% |
96.8 MB |
1.8 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_LMJ-N1-BDNA-1_B23MHTGLT4_1)
|
9s |
3s |
4s |
2s |
313.9 MB |
354% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_MYO-N1-BDNA-1_B23MHTGLT4_1)
|
9s |
2s |
4s |
3s |
331.3 MB |
367% |
97.1 MB |
2.1 MB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_QZ1-N1-BDNA-1_B23KFG5LT4_1)
|
28s |
21s |
5s |
2s |
333.7 MB |
373% |
96.8 MB |
1.8 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_2VD-N1-BDNA-1_A23KFG7LT4_1)
|
9s |
2s |
5s |
2s |
321.4 MB |
372% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_3Q5-N1-BDNA-1_B23MHTGLT4_1)
|
17s |
12s |
4s |
1s |
407.6 MB |
337% |
96.8 MB |
1.8 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_3ZV-N1-BDNA-1_B23MHTGLT4_1)
|
9s |
2s |
5s |
2s |
318.7 MB |
341% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_43A-N1-BDNA-1_A23KFG7LT4_1)
|
9s |
2s |
4s |
3s |
306.1 MB |
354% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_4UT-N1-BDNA-1_B23MHTGLT4_1)
|
16s |
11s |
3s |
2s |
259.8 MB |
367% |
97.0 MB |
1.8 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_5MS-N1-BDNA-1_B23KFG5LT4_1)
|
10s |
3s |
5s |
2s |
291.9 MB |
354% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_5WB-N1-BDNA-1_B23KFG5LT4_1)
|
11s |
3s |
5s |
3s |
318.5 MB |
374% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_6I8-N1-BDNA-1_B23MHTGLT4_1)
|
18s |
13s |
3s |
2s |
242.9 MB |
367% |
97.0 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1136_85O-N1-BDNA-1_B23KGCJLT4_1)
|
9s |
2s |
3s |
4s |
390.0 MB |
362% |
96.9 MB |
1.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (1029_BC1I-N1-BDNA-1_B23L5TMLT4_1)
|
18s |
3s |
12s |
3s |
491.4 MB |
202% |
127.7 MB |
37.2 MB |
0 bytes |
37.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1)
|
20s |
2s |
14s |
4s |
457.6 MB |
191% |
140.5 MB |
52.0 MB |
0 bytes |
52.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (1029_LMJ-N1-BDNA-1_B23MHTGLT4_1)
|
17s |
3s |
11s |
3s |
498.8 MB |
205% |
127.6 MB |
37.3 MB |
0 bytes |
37.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (1029_MYO-N1-BDNA-1_B23MHTGLT4_1)
|
17s |
3s |
11s |
3s |
536.9 MB |
219% |
126.8 MB |
36.5 MB |
0 bytes |
36.5 MB |
1 |