specimen gene1 gene2 chr1 pos1 chr2 pos2 sv_type event_id score filter_call pon_bp1_count pon_bp2_count pon_pair_count cosmic_hit somaticscore manual_vaf is_pass is_interchrom is_paralog_of_higher_score_call 1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1.manta_fusion ARFGAP3 PACSIN2 chr22 42806825 chr22 42882298 DUP MantaDUP:TANDEM:1878:0:1:0:0:0 0.948 PASS 0 0 0 0 189.0 0.30870279146141216 1 0 0 1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1.manta_fusion DYSF HLA-DRB1 chr2 71603570 chr6 32579077 BND MantaBND:0:30184:30295:0:0:0:1 0.014 FAIL 0 553 0 0 30.0 0.011968085106382979 1 1 0 1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1.manta_fusion MUC3A . chr7 100958578 chrUn_JTFH01001084v1_decoy 1341 BND MantaBND:0:27530:27531:12:0:0:0 0.0 FAIL 241 0 0 0 46.0 0.01444043321299639 1 1 0