File Info
- Filename
- 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/manta_fusion_7sample_validation_0514-1620__269416e3--20260514-162000/variant_calling/manta_fusion/1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1/1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion.fusion_calls.tsv
- Size
- 4.3 KB
- Workflow Run
- manta_fusion_7sample_validation_0514-1620
- Published
- May 14, 2026 10:15 AM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | FEM1C | . | chr5 | 115525208 | chr5 | 115520841 | BND | MantaBND:7944:0:1:0:2:0:1 | 0.954 | PASS | 0 | 0 | 0 | 0 | 240.0 | 0.32778581765557163 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | FEM1C | TRERF1 | chr5 | 115525118 | chr6 | 42435605 | BND | MantaBND:7945:0:1:0:0:0:0 | 0.95 | PASS | 0 | 0 | 0 | 0 | 522.0 | 0.37347767253044656 | 1 | 1 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | TSSK1B | . | chr5 | 113434833 | chr5 | 107686790 | BND | MantaBND:7940:0:2:0:0:0:0 | 0.834 | PASS | 0 | 0 | 0 | 0 | 102.0 | 0.064464141821112 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | RARA | . | chr17 | 40354349 | chr17 | 41798992 | BND | MantaBND:1:11736:11774:0:5:0:0 | 0.8 | PASS | 0 | 0 | 0 | 0 | 762.0 | 0.2134375905010136 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | KRT28 | . | chr17 | 40797019 | chr17 | 40472874 | BND | MantaBND:1:12014:12015:0:0:0:0 | 0.09 | FAIL | 0 | 0 | 0 | 0 | 60.0 | 0.03183673469387755 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | EMP2 | TVP23A | chr16 | 10528705 | chr16 | 10773430 | BND | MantaBND:1:14456:14457:0:0:0:1 | 0.076 | FAIL | 0 | 0 | 0 | 0 | 42.0 | 0.024949698189134808 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | GAST | STARD3 | chr17 | 41715586 | chr17 | 39664060 | DEL | MantaDEL:1:14482:14590:0:0:0 | 0.06 | FAIL | 0 | 0 | 0 | 0 | 36.0 | 0.00874224478285392 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | IGFBP4 | TOP2A | chr17 | 40453154 | chr17 | 40389399 | DUP | MantaDUP:TANDEM:1:11788:11799:0:0:0 | 0.034 | FAIL | 2 | 0 | 0 | 0 | 79.0 | 0.011500649230198478 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | CASC3 | ERBB2 | chr17 | 40147327 | chr17 | 39717559 | DUP | MantaDUP:TANDEM:1:11437:11450:0:0:0 | 0.032 | FAIL | 0 | 0 | 0 | 0 | 55.0 | 0.004815981925203639 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | GRIN2A | . | chr16 | 9829530 | chr17 | 40544198 | BND | MantaBND:1:14386:14387:0:0:0:1 | 0.028 | FAIL | 0 | 0 | 0 | 0 | 63.0 | 0.009706907925737442 | 1 | 1 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | BIRC3 | . | chr11 | 102339325 | chr19 | 27853429 | BND | MantaBND:1:7652:7664:0:3:0:0 | 0.02 | FAIL | 2 | 0 | 0 | 0 | 59.0 | 0.005915586573612496 | 1 | 1 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | C11orf65 | MMP20 | chr11 | 108368773 | chr11 | 102615129 | BND | MantaBND:1:7878:7899:0:0:0:0 | 0.018 | FAIL | 0 | 0 | 0 | 0 | 63.0 | 0.004913806992105687 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | CIITA | CLEC16A | chr16 | 10907574 | chr16 | 11134303 | DUP | MantaDUP:TANDEM:1:14491:14499:0:0:0 | 0.012 | FAIL | 21 | 0 | 0 | 0 | 178.0 | 0.015834348355663823 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | CDC6 | . | chr17 | 40304188 | chr17 | 43409898 | DEL | MantaDEL:1:11291:11655:1:1:0 | 0.012 | FAIL | 2 | 0 | 0 | 0 | 42.0 | 0.0015851101907245488 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | CWC25 | ERBB2 | chr17 | 38825038 | chr17 | 39717529 | BND | MantaBND:1:11437:11447:0:1:0:0 | 0.008 | FAIL | 0 | 0 | 0 | 0 | 44.0 | 0.0020685732016341727 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | SOCS1 | . | chr16 | 11254878 | chr17 | 41605941 | BND | MantaBND:1:14543:14547:0:0:0:0 | 0.004 | FAIL | 41 | 0 | 0 | 0 | 38.0 | 0.0009374023539214665 | 1 | 1 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | CDC6 | MLLT6 | chr17 | 40303255 | chr17 | 38715935 | BND | MantaBND:1:11290:11291:0:0:0:1 | 0.004 | FAIL | 6 | 0 | 0 | 0 | 44.0 | 0.0020110854956589983 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | GRB7 | JUP | chr17 | 39743236 | chr17 | 41764506 | DUP | MantaDUP:TANDEM:1:11488:11491:0:1:0 | 0.004 | FAIL | 0 | 0 | 0 | 0 | 36.0 | 0.004451038575667656 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | STARD3 | TOP2A | chr17 | 39655515 | chr17 | 40398611 | BND | MantaBND:1:11805:11806:0:0:0:0 | 0.002 | FAIL | 0 | 0 | 0 | 0 | 42.0 | 0.004654493376297888 | 1 | 0 | 0 |
| 1173_9C-T1-TDNA-SLD-01_B23T7FYLT4_1_vs_1173_9C-N1-BDNA-01_A23MHW3LT4_1.manta_fusion | NOL4L | ZNF569 | chr20 | 32550236 | chr19 | 37413086 | BND | MantaBND:1:21690:21691:0:0:0:1 | 0.0 | FAIL | 0 | 0 | 0 | 0 | 34.0 | 0.011389521640091117 | 1 | 1 | 0 |
21 rows