File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/af9f3a4e90198403ccca4873e531f0/.command.log
Size
877 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (1173_Q7O-N1-BDNA-01_A23KFG7LT4_1)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260320_LH00519_0072_A23KFG7LT4__d7a6b981--20260322-104015/alignments/recalibrated/1173_Q7O-N1-BDNA-01_A23KFG7LT4_1/1173_Q7O-N1-BDNA-01_A23KFG7LT4_1.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/af9f3a4e90198403ccca4873e531f0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/af9f3a4e90198403ccca4873e531f0/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260320_LH00519_0072_A23KFG7LT4__d7a6b981--20260322-104015/alignments/recalibrated/1173_Q7O-N1-BDNA-01_A23KFG7LT4_1/1173_Q7O-N1-BDNA-01_A23KFG7LT4_1.recalibrated.bam.bai
==> STAGING COMPLETE (4 inputs)

[W::hts_idx_load3] The index file is older than the data file: 1173_Q7O-N1-BDNA-01_A23KFG7LT4_1.recalibrated.bam.bai