File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/e79f6cc6991e439849a4b446ca2087/.command.log
Size
922 bytes
Task
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (1136_87H-T1-TDNA-1_A23KC75LT4_1)
Attempt

Content

View in new tab 
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00519_0073_A23KC75LT4__d7a6b981--20260325-161016/alignments/recalibrated/1136_87H-T1-TDNA-1_A23KC75LT4_1/1136_87H-T1-TDNA-1_A23KC75LT4_1.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/e79f6cc6991e439849a4b446ca2087/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/e79f6cc6991e439849a4b446ca2087/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260323_LH00519_0073_A23KC75LT4__d7a6b981--20260325-161016/alignments/recalibrated/1136_87H-T1-TDNA-1_A23KC75LT4_1/1136_87H-T1-TDNA-1_A23KC75LT4_1.recalibrated.bam.bai
==> STAGING COMPLETE (5 inputs)