NFCORE_SAREK:SAREK:BAM_APPLYBQSR_SENTIEON:SAMTOOLS_INDEX (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) - mipeters-bqsr-optimization-test-2026-01-26_16-21-03z - Workflow Tracker

Runs
mipeters-bqs..6_16-21-03z
Tasks
SAMTOOLS_INDEX (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46)

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Task Info

Status: succeeded
Hash: 070b0c7e7b85
Process: NFCORE_SAREK:SAREK:BAM_APPLYBQSR_SENTIEON:SAMTOOLS_INDEX
Tag: p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: ce/754a84
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/754a8458384427b6960c0d5f37dcad
Native ID: nf-ce754a8458384427b6960c0d5f37dcad-b1912

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 13.8 MB / 24.0 GB
Process I/O (rchar / wchar): 120.5 GB / 3.5 MB
Disk I/O (read / write): 120.5 GB / 3.6 MB
Host: i-0af539fa7d69a0c83 ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:01:07 PM
Completed: Jan 26, 2026 3:07:08 PM
Total Duration: 6m 0s

Phases

Queue: 2s
Execution: 26s
Stage/Unstage: 5m 32s

Attempt 3

Execution

Status: failed
Hash: 28/9b4bba
Exit Code: 137
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/9b4bbabcd66be207f0383200d998a0
Native ID: nf-289b4bbabcd66be207f0383200d998a0-d0517

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 12.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0af539fa7d69a0c83 ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:58:28 PM
Completed: Jan 26, 2026 3:01:06 PM
Total Duration: 2m 38s

Phases

Queue: 8s
Execution: 2m 30s
Stage/Unstage: 0s

Attempt 2

Execution

Status: succeeded
Hash: 63/9b9df4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/9b9df47d0a6854f389844244cadd76
Native ID: nf-639b9df47d0a6854f389844244cadd76-ddc9f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 13.8 MB / 24.0 GB
Process I/O (rchar / wchar): 120.5 GB / 3.5 MB
Disk I/O (read / write): 120.5 GB / 3.6 MB
Host: i-050e6ef32129af574 ( on-demand)

Runtime

Submitted: Jan 24, 2026 12:15:20 PM
Completed: Jan 24, 2026 12:21:12 PM
Total Duration: 5m 51s

Phases

Queue: 2s
Execution: 27s
Stage/Unstage: 5m 22s

Attempt 1

Execution

Status: failed
Hash: 60/45cc37
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/45cc370c53f67d6c27de9d76dcda62
Native ID: nf-6045cc370c53f67d6c27de9d76dcda62-310f0

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 12.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0f10561f55d7dd90e ( on-demand)

Runtime

Submitted: Jan 24, 2026 12:11:10 PM
Completed: Jan 24, 2026 12:15:09 PM
Total Duration: 3m 58s

Phases

Queue: 9s
Execution: 3m 49s
Stage/Unstage: 0s