NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) - mipeters-bqsr-optimization-test-2026-01-26_16-21-03z - Workflow Tracker

Runs
mipeters-bqs..6_16-21-03z
Tasks
PICARD_COLLECTHSMETRICS (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46)

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Task Info

Status: succeeded
Hash: 480c762fcda7
Process: NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS
Tag: p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46
Attempts: 2

Attempt 2

Execution

Status: succeeded - cached
Hash: e2/057fc6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/picard:3.3.0--hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/057fc6c98ad01250f9bcbf2e4fe8ab
Native ID: nf-e2057fc6c98ad01250f9bcbf2e4fe8ab-6ca1e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 1.8 GB / 12.0 GB
Process I/O (rchar / wchar): 94.7 GB / 21.3 MB
Disk I/O (read / write): 96.5 GB / 21.0 MB
Host: i-0573fe75ad2999756 ( on-demand)

Runtime

Submitted: Jan 24, 2026 5:52:59 AM
Completed: Jan 24, 2026 1:00:24 PM
Total Duration: 7h 7m

Phases

Queue: 18s
Execution: 7h 0m
Stage/Unstage: 6m 25s

Attempt 1

Execution

Status: failed
Hash: 5d/fc1b4c
Exit Code: 137
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/picard:3.3.0--hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/fc1b4c327dedd05653f8fb45250491
Native ID: nf-5dfc1b4c327dedd05653f8fb45250491-709d7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 1
Memory (peak / alloc): - / 6.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0573fe75ad2999756 ( on-demand)

Runtime

Submitted: Jan 24, 2026 5:43:01 AM
Completed: Jan 24, 2026 5:52:59 AM
Total Duration: 9m 58s

Phases

Queue: 38s
Execution: 9m 19s
Stage/Unstage: 0s