succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 7h 10m 14s 7h 3m 6m 33s 2.7 GB 110% 94.7 GB 28.3 MB 96.4 GB 27.9 MB 2
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 3h 15m 18s 3h 8m 6m 34s 1.8 GB 102% 94.6 GB 15.9 MB 94.5 GB 15.5 MB 2
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTMULTIPLEMETRICS (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 5h 59m 15s 5h 51m 7m 51s 1.2 GB 103% 97.6 GB 1.3 MB 97.6 GB 944.0 KB 2
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:CRAM_QC_MOSDEPTH_SAMTOOLS:MOSDEPTH (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 29m 12s 17s 23m 35s 5m 20s 2.0 GB 269% 51.5 GB 1.4 GB 51.5 GB 1.4 GB 2
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:CRAM_QC_MOSDEPTH_SAMTOOLS:SAMTOOLS_STATS (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 1h 2m 4s 1h 0m 1m 51s 328.3 MB 160% 54.6 GB 290.3 KB 53.9 GB 296.0 KB 2
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:SEQTOOL_QC (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 11h 50m 1m 23s 11h 45m 3m 50s 4.8 GB 100% 2.7 TB 1.6 GB 2.7 TB 265.9 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 4h 20m 9s 4h 12m 7m 55s 9.7 GB 603% 483.7 GB 289.6 GB 333.3 GB 289.6 GB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 13m 58s 2s 9m 2s 4m 54s 2.0 GB 243% 123.6 GB 1.4 GB 123.6 GB 1.4 GB 4
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 1h 4m 2s 59m 53s 4m 51s 319.8 MB 142% 126.6 GB 316.9 KB 126.3 GB 320.0 KB 4
succeeded NFCORE_SAREK:SAREK:CRAM_TO_BAM (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 3h 52m 19s 3h 39m 12m 21s 652.9 MB 223% 145.3 GB 93.8 GB 145.4 GB 93.9 GB 1
succeeded NFCORE_SAREK:SAREK:CRAM_TO_BAM_RECAL (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 1h 6m 2s 53m 20s 13m 21s 854.4 MB 430% 312.3 GB 188.6 GB 312.4 GB 188.8 GB 4
succeeded NFCORE_SAREK:SAREK:FASTP (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46-lane_1) 1h 15m 10s 1h 9m 5m 47s 9.9 GB 1277% 157.5 GB 135.5 GB 156.8 GB 135.5 GB 2
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 23m 12s 1m 14s 21m 29s 28s 42.0 GB 1239% 55.1 GB 48.9 GB 0 bytes 10.6 GB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 23m 10s 1m 14s 21m 23s 32s 41.9 GB 1238% 55.1 GB 48.9 GB 0 bytes 10.6 GB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 1h 0m 9s 59m 43s 58s 42.2 GB 1227% 65.9 GB 59.6 GB 138.9 MB 13.0 GB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 59m 39s 10s 58m 31s 57s 42.1 GB 1228% 65.9 GB 59.5 GB 38.9 MB 13.0 GB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 55m 59s 9s 54m 45s 1m 4s 42.2 GB 1239% 65.9 GB 59.5 GB 0 bytes 13.0 GB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 55m 28s 9s 54m 16s 1m 2s 42.2 GB 1237% 65.9 GB 59.6 GB 0 bytes 13.0 GB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 25m 50s 1m 17s 23m 59s 33s 41.9 GB 1242% 65.9 GB 59.5 GB 0 bytes 13.0 GB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) 23m 22s 1m 16s 21m 34s 31s 42.0 GB 1236% 55.1 GB 48.9 GB 0 bytes 10.6 GB 1
58 items found |
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