NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) - mipeters-bqsr-optimization-test-2026-01-26_16-21-03z - Workflow Tracker

Runs
mipeters-bqs..6_16-21-03z
Tasks
PICARD_COLLECTHSMETRICS (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46)

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Task Info

Status: succeeded
Hash: ce1d0a0ed9b4
Process: NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS
Tag: p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46
Attempts: 2

Attempt 2

Execution

Status: succeeded - cached
Hash: 35/28d42b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/picard:3.3.0--hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/28d42bd56fd88b8725d56336819895
Native ID: nf-3528d42bd56fd88b8725d56336819895-99f36

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 1.9 GB / 12.0 GB
Process I/O (rchar / wchar): 94.6 GB / 16.3 MB
Disk I/O (read / write): 94.7 GB / 16.0 MB
Host: i-0573fe75ad2999756 ( on-demand)

Runtime

Submitted: Jan 24, 2026 5:51:59 AM
Completed: Jan 24, 2026 10:16:36 AM
Total Duration: 4h 24m

Phases

Queue: 20s
Execution: 4h 17m
Stage/Unstage: 6m 40s

Attempt 1

Execution

Status: failed
Hash: 1b/f04f6d
Exit Code: 137
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/picard:3.3.0--hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/f04f6d6e014008850c8ed532ddcf66
Native ID: nf-1bf04f6d6e014008850c8ed532ddcf66-fc062

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 1
Memory (peak / alloc): - / 6.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0573fe75ad2999756 ( on-demand)

Runtime

Submitted: Jan 24, 2026 5:43:01 AM
Completed: Jan 24, 2026 5:51:59 AM
Total Duration: 8m 58s

Phases

Queue: 38s
Execution: 8m 19s
Stage/Unstage: 0s