File Info
- Filename
- Demultiplex_Stats.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-data-01/users/mipeters/semiproductionize/daq/A23KKJ7LT4/2026-01-16_20-23-27z/bclconvert/L006/output/Reports/Demultiplex_Stats.csv
- Size
- 5.6 KB
- Workflow Run
- mipeters-daq-A23KKJ7LT4-2026-01-16_20-23-27z
- Published
- Jan 16, 2026 12:58 PM
Content
View in new tab| Lane | SampleID | Index | # Reads | # Perfect Index Reads | # One Mismatch Index Reads | # Two Mismatch Index Reads | % Reads | % Perfect Index Reads | % One Mismatch Index Reads | % Two Mismatch Index Reads |
| 6 | tih_rna_sample_00044_23KKJ7LT4_1 | GCGCGGTTAA-AAGCTATAGC | 79130300 | 77737254 | 1393046 | 0 | 0.0187 | 0.9824 | 0.0176 | 0.0000 |
| 6 | FFPE_V4_0001_RNA_0002_23KKJ7LT4_1 | TTCCTTGAGG-TAAGACAGCA | 69816589 | 68658853 | 1157736 | 0 | 0.0165 | 0.9834 | 0.0166 | 0.0000 |
| 6 | tih_rna_sample_00208_23KKJ7LT4_1 | GAGTCGCTTC-AGCGAAGATT | 96667829 | 94836239 | 1831590 | 0 | 0.0229 | 0.9811 | 0.0189 | 0.0000 |
| 6 | tih_rna_sample_00045_23KKJ7LT4_1 | GTACGCTCAA-ATTGATGGCG | 82172744 | 80790041 | 1382703 | 0 | 0.0194 | 0.9832 | 0.0168 | 0.0000 |
| 6 | tih_rna_sample_00046_23KKJ7LT4_1 | TAGAAGATCG-CGACCAGTGT | 78575846 | 76577028 | 1998818 | 0 | 0.0186 | 0.9746 | 0.0254 | 0.0000 |
| 6 | tih_rna_sample_00047_23KKJ7LT4_1 | AACCTAGTGC-TACAGGTCCT | 103051149 | 101452566 | 1598583 | 0 | 0.0244 | 0.9845 | 0.0155 | 0.0000 |
| 6 | tih_rna_sample_00048_23KKJ7LT4_1 | CGTGTATGTC-GCATCTCTAT | 86792910 | 85520235 | 1272675 | 0 | 0.0205 | 0.9853 | 0.0147 | 0.0000 |
| 6 | tih_rna_sample_00216_23KKJ7LT4_1 | TTCAGATCCA-TGGCATTGGA | 17506150 | 17206775 | 299375 | 0 | 0.0041 | 0.9829 | 0.0171 | 0.0000 |
| 6 | tih_rna_sample_00050_23KKJ7LT4_1 | CTCACCAGTT-TTGGTGTGTC | 92620607 | 90713211 | 1907396 | 0 | 0.0219 | 0.9794 | 0.0206 | 0.0000 |
| 6 | tih_rna_sample_00051_23KKJ7LT4_1 | ACTAGTAGTC-ACGTACACTC | 97569926 | 96087326 | 1482600 | 0 | 0.0231 | 0.9848 | 0.0152 | 0.0000 |
| 6 | tih_rna_sample_00052_23KKJ7LT4_1 | AATAGACTGC-TCAAGGTCGC | 116776100 | 114696222 | 2079878 | 0 | 0.0276 | 0.9822 | 0.0178 | 0.0000 |
| 6 | tih_rna_sample_00053_23KKJ7LT4_1 | ATGATCAACG-GTATAGCGTC | 42775262 | 42019409 | 755853 | 0 | 0.0101 | 0.9823 | 0.0177 | 0.0000 |
| 6 | tih_rna_sample_00054_23KKJ7LT4_1 | TAGGAAGCGG-CCAATCCAGG | 18218538 | 17906056 | 312482 | 0 | 0.0043 | 0.9828 | 0.0172 | 0.0000 |
| 6 | NTC_0001_0001_23KKJ7LT4_2 | GCATCCTACT-GACATCGCGA | 1284664 | 1258118 | 26546 | 0 | 0.0003 | 0.9793 | 0.0207 | 0.0000 |
| 6 | tih_rna_sample_00056_23KKJ7LT4_1 | AGTCCAGCGT-TGTCGTATTG | 69029743 | 67761811 | 1267932 | 0 | 0.0163 | 0.9816 | 0.0184 | 0.0000 |
| 6 | tih_rna_sample_00057_23KKJ7LT4_1 | AGGCAGCCAT-GAGTGTCTAG | 11406929 | 11203401 | 203528 | 0 | 0.0027 | 0.9822 | 0.0178 | 0.0000 |
| 6 | tih_rna_sample_00058_23KKJ7LT4_1 | GCGACTCGTA-CAGGCCATGT | 75852940 | 73566624 | 2286316 | 0 | 0.0179 | 0.9699 | 0.0301 | 0.0000 |
| 6 | tih_rna_sample_00219_23KKJ7LT4_1 | GTATCTGAGG-ACGTATCTTG | 83348080 | 82155589 | 1192491 | 0 | 0.0197 | 0.9857 | 0.0143 | 0.0000 |
| 6 | tih_rna_sample_00060_23KKJ7LT4_1 | CATCACCTAA-TGGTGGTATT | 56614262 | 54867086 | 1747176 | 0 | 0.0134 | 0.9691 | 0.0309 | 0.0000 |
| 6 | tih_rna_sample_00061_23KKJ7LT4_1 | CGGCATATAC-ATGAGCTGGA | 95977130 | 94327956 | 1649174 | 0 | 0.0227 | 0.9828 | 0.0172 | 0.0000 |
| 6 | tih_rna_sample_00223_23KKJ7LT4_1 | CACGAGTGTC-TAGGCTAGAG | 104051371 | 102567339 | 1484032 | 0 | 0.0246 | 0.9857 | 0.0143 | 0.0000 |
| 6 | tih_rna_sample_00063_23KKJ7LT4_1 | CGGAGACTAT-ATGCTTCTAC | 109654973 | 107472123 | 2182850 | 0 | 0.0259 | 0.9801 | 0.0199 | 0.0000 |
| 6 | tih_rna_sample_00064_23KKJ7LT4_1 | AAGGTGTTAG-TGTGCTGGTG | 137751926 | 135205444 | 2546482 | 0 | 0.0326 | 0.9815 | 0.0185 | 0.0000 |
| 6 | FFPE_HD789_02_RNA_0006_23KKJ7LT4_1 | GCGATGGAAG-GCCGCAAGAT | 137876561 | 135516228 | 2360333 | 0 | 0.0326 | 0.9829 | 0.0171 | 0.0000 |
| 6 | tih_rna_sample_00224_23KKJ7LT4_1 | ACGGTCGCAT-GTACTCTCTA | 81989278 | 80677927 | 1311351 | 0 | 0.0194 | 0.9840 | 0.0160 | 0.0000 |
| 6 | tih_rna_sample_00225_23KKJ7LT4_1 | TTACACACGG-AACTCCGAGA | 116006505 | 114147623 | 1858882 | 0 | 0.0274 | 0.9840 | 0.0160 | 0.0000 |
| 6 | tih_rna_sample_00066_23KKJ7LT4_1 | CGAGATTAGA-CTAATCGCGG | 83885974 | 82114846 | 1771128 | 0 | 0.0198 | 0.9789 | 0.0211 | 0.0000 |
| 6 | tih_rna_sample_00226_23KKJ7LT4_1 | CAAGGATCGA-GCAGACACAA | 79510540 | 78197625 | 1312915 | 0 | 0.0188 | 0.9835 | 0.0165 | 0.0000 |
| 6 | tih_rna_sample_00068_23KKJ7LT4_1 | ACAACACACA-CATCGGCACT | 85373790 | 84033192 | 1340598 | 0 | 0.0202 | 0.9843 | 0.0157 | 0.0000 |
| 6 | tih_rna_sample_00239_23KKJ7LT4_1 | AAGAGCTCGC-CCAATAGATC | 70917229 | 69782839 | 1134390 | 0 | 0.0168 | 0.9840 | 0.0160 | 0.0000 |
| 6 | tih_rna_sample_00070_23KKJ7LT4_1 | ACAGAGGCGT-GACATATCGG | 94683787 | 93108045 | 1575742 | 0 | 0.0224 | 0.9834 | 0.0166 | 0.0000 |
| 6 | tih_rna_sample_00071_23KKJ7LT4_1 | AACTGTACGG-CTCCAATATG | 105244449 | 103344271 | 1900178 | 0 | 0.0249 | 0.9819 | 0.0181 | 0.0000 |
| 6 | tih_rna_sample_00072_23KKJ7LT4_1 | GCGAAGTAGG-ACCATTGTGT | 112411725 | 110681727 | 1729998 | 0 | 0.0266 | 0.9846 | 0.0154 | 0.0000 |
| 6 | tih_rna_sample_00073_23KKJ7LT4_1 | GTGAAGACAC-TGGCTTGATC | 68109212 | 67073166 | 1036046 | 0 | 0.0161 | 0.9848 | 0.0152 | 0.0000 |
| 6 | tih_rna_sample_00074_23KKJ7LT4_1 | GACTTAGGTC-CTATGGACTT | 146675817 | 144650490 | 2025327 | 0 | 0.0347 | 0.9862 | 0.0138 | 0.0000 |
| 6 | tih_rna_sample_00243_23KKJ7LT4_1 | AGGACGGACA-GAAGTCGTGG | 84663159 | 82945636 | 1717523 | 0 | 0.0200 | 0.9797 | 0.0203 | 0.0000 |
| 6 | tih_rna_sample_00244_23KKJ7LT4_1 | CCTATGTGTA-TAGTGAGTCG | 105216630 | 103518049 | 1698581 | 0 | 0.0249 | 0.9839 | 0.0161 | 0.0000 |
| 6 | tih_rna_sample_00077_23KKJ7LT4_1 | CAACGTTGAC-TTGGACGGAA | 80706860 | 79242500 | 1464360 | 0 | 0.0191 | 0.9819 | 0.0181 | 0.0000 |
| 6 | tih_rna_sample_00078_23KKJ7LT4_1 | TGACATAGGT-TACCAGAGAT | 108264888 | 106717391 | 1547497 | 0 | 0.0256 | 0.9857 | 0.0143 | 0.0000 |
| 6 | tih_rna_sample_00079_23KKJ7LT4_1 | TTACACCAAC-ATGAGTTAGG | 58236668 | 57283574 | 953094 | 0 | 0.0138 | 0.9836 | 0.0164 | 0.0000 |
| 6 | tih_rna_sample_00080_23KKJ7LT4_1 | CCTGGAATTA-CGTCATCGAA | 62969329 | 61429925 | 1539404 | 0 | 0.0149 | 0.9756 | 0.0244 | 0.0000 |
| 6 | tih_rna_sample_00081_23KKJ7LT4_1 | GCAACATCAA-TGACCTAGTT | 89267018 | 87624020 | 1642998 | 0 | 0.0211 | 0.9816 | 0.0184 | 0.0000 |
| 6 | tih_rna_sample_00082_23KKJ7LT4_1 | ACAGCCAGGT-TCATGGTACT | 94542961 | 92988621 | 1554340 | 0 | 0.0224 | 0.9836 | 0.0164 | 0.0000 |
| 6 | tih_rna_sample_00083_23KKJ7LT4_1 | TAGTCCATCT-GACAGGACAG | 82253451 | 80870848 | 1382603 | 0 | 0.0194 | 0.9832 | 0.0168 | 0.0000 |
| 6 | tih_rna_sample_00084_23KKJ7LT4_1 | GCCTCTCAGA-CGTGACGACT | 44146864 | 43322917 | 823947 | 0 | 0.0104 | 0.9813 | 0.0187 | 0.0000 |
| 6 | tih_rna_sample_00245_23KKJ7LT4_1 | TAGGTTCAAG-ACTTACCGGC | 128903160 | 126993085 | 1910075 | 0 | 0.0305 | 0.9852 | 0.0148 | 0.0000 |
| 6 | tih_rna_sample_00086_23KKJ7LT4_1 | AAGACTCTCG-GCTCTCCTTC | 100380110 | 98487996 | 1892114 | 0 | 0.0237 | 0.9812 | 0.0188 | 0.0000 |
| 6 | tih_rna_sample_00247_23KKJ7LT4_1 | GAAGATCGAC-AGTGACCACG | 55821575 | 54910347 | 911228 | 0 | 0.0132 | 0.9837 | 0.0163 | 0.0000 |
| 6 | Undetermined | 224448301 | 224448301 | 0 | 0 | 0.0531 | 1.0000 | 0.0000 | 0.0000 |
50 rows