patient,sex,status,sample,lane,fastq_1,fastq_2
HCC1395,XX,1,HCC1395_tumor,lane_1,s3://natera-platform-sandbox/pipeline-inputs/test_sarek/end_to_end_regression/fastq/HCC1395_tumor.chr21_R1.fastq.gz,s3://natera-platform-sandbox/pipeline-inputs/test_sarek/end_to_end_regression/fastq/HCC1395_tumor.chr21_R2.fastq.gz
HCC1395,XX,0,HCC1395_BL,lane_1,s3://natera-platform-sandbox/pipeline-inputs/test_sarek/end_to_end_regression/fastq/HCC1395_BL.chr21_R1.fastq.gz,s3://natera-platform-sandbox/pipeline-inputs/test_sarek/end_to_end_regression/fastq/HCC1395_BL.chr21_R2.fastq.gz
Sig_18,XY,1,Sig_18_tissue,lane_1,s3://natera-platform-sandbox/pipeline-inputs/test_sarek/end_to_end_regression/fastq/Sig_18_tissue.chr21_R1.fastq.gz,s3://natera-platform-sandbox/pipeline-inputs/test_sarek/end_to_end_regression/fastq/Sig_18_tissue.chr21_R2.fastq.gz
Sig_18,XY,0,Sig_18_Blood,lane_1,s3://natera-platform-sandbox/pipeline-inputs/test_sarek/end_to_end_regression/fastq/Sig_18_Blood.chr21_R1.fastq.gz,s3://natera-platform-sandbox/pipeline-inputs/test_sarek/end_to_end_regression/fastq/Sig_18_Blood.chr21_R2.fastq.gz