{
  "metadata": {
    "version": "1.0",
    "mode": "fastqc",
    "tools": [
      "fastqc"
    ]
  },
  "samples": {
    "HCC1395_BL": {
      "fastqc": {
        "R1": {
          "total_sequences": 976707,
          "total_bases": 146500000.0,
          "poor_quality_sequences": 0,
          "sequence_length": 150,
          "gc_percent": 50,
          "deduplicated_percent": 62.032506779419684,
          "max_adapter_percent": 13.589745952470906,
          "module_statuses": {
            "Basic Statistics": "pass",
            "Per base sequence quality": "pass",
            "Per tile sequence quality": "pass",
            "Per sequence quality scores": "pass",
            "Per base sequence content": "pass",
            "Per sequence GC content": "fail",
            "Per base N content": "pass",
            "Sequence Length Distribution": "pass",
            "Sequence Duplication Levels": "warn",
            "Overrepresented sequences": "pass",
            "Adapter Content": "fail"
          }
        },
        "R2": {
          "total_sequences": 976707,
          "total_bases": 146500000.0,
          "poor_quality_sequences": 0,
          "sequence_length": 150,
          "gc_percent": 50,
          "deduplicated_percent": 62.926784517398936,
          "max_adapter_percent": 13.533178322669952,
          "module_statuses": {
            "Basic Statistics": "pass",
            "Per base sequence quality": "pass",
            "Per tile sequence quality": "fail",
            "Per sequence quality scores": "pass",
            "Per base sequence content": "pass",
            "Per sequence GC content": "warn",
            "Per base N content": "warn",
            "Sequence Length Distribution": "pass",
            "Sequence Duplication Levels": "warn",
            "Overrepresented sequences": "pass",
            "Adapter Content": "fail"
          }
        }
      }
    },
    "Sig_18_Blood": {
      "fastqc": {
        "R1": {
          "total_sequences": 1239317,
          "total_bases": 185800000.0,
          "poor_quality_sequences": 0,
          "sequence_length": 150,
          "gc_percent": 49,
          "deduplicated_percent": 59.94780758710003,
          "max_adapter_percent": 12.418089964068917,
          "module_statuses": {
            "Basic Statistics": "pass",
            "Per base sequence quality": "pass",
            "Per tile sequence quality": "warn",
            "Per sequence quality scores": "pass",
            "Per base sequence content": "pass",
            "Per sequence GC content": "fail",
            "Per base N content": "pass",
            "Sequence Length Distribution": "pass",
            "Sequence Duplication Levels": "warn",
            "Overrepresented sequences": "pass",
            "Adapter Content": "fail"
          }
        },
        "R2": {
          "total_sequences": 1239317,
          "total_bases": 185800000.0,
          "poor_quality_sequences": 0,
          "sequence_length": 150,
          "gc_percent": 49,
          "deduplicated_percent": 60.782461448100065,
          "max_adapter_percent": 12.40275893899624,
          "module_statuses": {
            "Basic Statistics": "pass",
            "Per base sequence quality": "pass",
            "Per tile sequence quality": "fail",
            "Per sequence quality scores": "pass",
            "Per base sequence content": "pass",
            "Per sequence GC content": "warn",
            "Per base N content": "warn",
            "Sequence Length Distribution": "pass",
            "Sequence Duplication Levels": "warn",
            "Overrepresented sequences": "pass",
            "Adapter Content": "fail"
          }
        }
      }
    },
    "HCC1395_tumor": {
      "fastqc": {
        "R1": {
          "total_sequences": 2674705,
          "total_bases": 401200000.0,
          "poor_quality_sequences": 0,
          "sequence_length": 150,
          "gc_percent": 50,
          "deduplicated_percent": 42.288324423014544,
          "max_adapter_percent": 14.6512232190092,
          "module_statuses": {
            "Basic Statistics": "pass",
            "Per base sequence quality": "pass",
            "Per tile sequence quality": "pass",
            "Per sequence quality scores": "pass",
            "Per base sequence content": "pass",
            "Per sequence GC content": "fail",
            "Per base N content": "pass",
            "Sequence Length Distribution": "pass",
            "Sequence Duplication Levels": "fail",
            "Overrepresented sequences": "pass",
            "Adapter Content": "fail"
          }
        },
        "R2": {
          "total_sequences": 2674705,
          "total_bases": 401200000.0,
          "poor_quality_sequences": 0,
          "sequence_length": 150,
          "gc_percent": 50,
          "deduplicated_percent": 43.266465354595404,
          "max_adapter_percent": 14.56201711964497,
          "module_statuses": {
            "Basic Statistics": "pass",
            "Per base sequence quality": "pass",
            "Per tile sequence quality": "fail",
            "Per sequence quality scores": "pass",
            "Per base sequence content": "pass",
            "Per sequence GC content": "fail",
            "Per base N content": "warn",
            "Sequence Length Distribution": "pass",
            "Sequence Duplication Levels": "fail",
            "Overrepresented sequences": "pass",
            "Adapter Content": "fail"
          }
        }
      }
    },
    "Sig_18_tissue": {
      "fastqc": {
        "R1": {
          "total_sequences": 6155086,
          "total_bases": 923200000.0,
          "poor_quality_sequences": 0,
          "sequence_length": 150,
          "gc_percent": 50,
          "deduplicated_percent": 32.003695342240306,
          "max_adapter_percent": 20.87111374235876,
          "module_statuses": {
            "Basic Statistics": "pass",
            "Per base sequence quality": "pass",
            "Per tile sequence quality": "pass",
            "Per sequence quality scores": "pass",
            "Per base sequence content": "pass",
            "Per sequence GC content": "pass",
            "Per base N content": "pass",
            "Sequence Length Distribution": "pass",
            "Sequence Duplication Levels": "fail",
            "Overrepresented sequences": "pass",
            "Adapter Content": "fail"
          }
        },
        "R2": {
          "total_sequences": 6155086,
          "total_bases": 923200000.0,
          "poor_quality_sequences": 0,
          "sequence_length": 150,
          "gc_percent": 50,
          "deduplicated_percent": 32.243112737067435,
          "max_adapter_percent": 20.625317014254552,
          "module_statuses": {
            "Basic Statistics": "pass",
            "Per base sequence quality": "pass",
            "Per tile sequence quality": "fail",
            "Per sequence quality scores": "pass",
            "Per base sequence content": "pass",
            "Per sequence GC content": "pass",
            "Per base N content": "warn",
            "Sequence Length Distribution": "pass",
            "Sequence Duplication Levels": "fail",
            "Overrepresented sequences": "pass",
            "Adapter Content": "fail"
          }
        }
      }
    }
  }
}