File Info
- Filename
- read_qc.xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_chr21.bed.tsv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-data-01/users/mipeters/semiproductionize/sarek/698115e9/test_regression_dev_b0193075/reports/raw_qc/qc_markdup/seqtools/HCC1395_tumor/HCC1395_tumor.dedup/read_qc.xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_chr21.bed.tsv
- Size
- 585 bytes
- Workflow Run
- mipeters-regression-dev-698115e9
- Published
- Feb 02, 2026 1:35 PM
Content
View in new tab| bam | reads | unmapped | frac_unmapped | unique_reads | frac_dupes | pairs | frac_reads_on_target | frac_reads_off_target | frac_pairs_on_target | frac_pairs_off_target | frag_size_q20 | frag_size_median | frag_size_q80 | proper_pairs | frac_proper_pairs | pairs_on_target | pairs_off_target | reads_on_target | reads_off_target | frag_size_mean | frag_size_std | dupes | n_q20 | n_q25 | n_q30 | n_bases |
| HCC1395_tumor.dedup.bam | 5349410 | 32 | 0.000006 | 3265854 | 0.389493 | 1632908 | 0.641116 | 0.358874 | 0.753123 | 0.246877 | 160 | 268 | 419 | 1631199 | 0.998953 | 1228494 | 402705 | 2093791 | 1172031 | 295.620949 | 121.652489 | 2083556 | 0.979988 | 0.942888 | 0.942888 | 802406700 |
2 rows