File Info
- Filename
- Sig_18_Blood.mutect2_tumor_only.filtered_custom.ann_snpEff.genes.txt
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- s3://natera-rnd-pltf-dev-nextflow-data-01/users/mipeters/semiproductionize/sarek/698115e9/test_regression_dev_b0193075/variant_calling/chip_variants/Sig_18_Blood/somatic_normal/Sig_18_Blood.mutect2_tumor_only.filtered_custom.ann_snpEff.genes.txt
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- Workflow Run
- mipeters-regression-dev-698115e9
- Published
- Feb 02, 2026 1:39 PM
Content
View in new tab# The following table is formatted as tab separated values. #GeneName GeneId TranscriptId BioType variants_impact_HIGH variants_impact_LOW variants_impact_MODERATE variants_impact_MODIFIER variants_effect_3_prime_UTR_variant variants_effect_5_prime_UTR_variant variants_effect_conservative_inframe_deletion variants_effect_conservative_inframe_insertion variants_effect_disruptive_inframe_deletion variants_effect_disruptive_inframe_insertion variants_effect_downstream_gene_variant variants_effect_frameshift_variant variants_effect_intron_variant variants_effect_missense_variant variants_effect_non_coding_transcript_exon_variant variants_effect_splice_region_variant variants_effect_stop_gained variants_effect_synonymous_variant variants_effect_upstream_gene_variant BAGE2 ENSG00000187172 ENST00000496773 transcribed_unprocessed_pseudogene 0 0 0 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 BRWD1 ENSG00000185658 ENST00000333229 protein_coding 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 BTG3 ENSG00000154640 ENST00000339775 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 C21orf62 ENSG00000205929 ENST00000382373 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 C21orf62-AS1 ENSG00000205930 ENST00000655231 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 CHODL ENSG00000154645 ENST00000299295 protein_coding 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 COL18A1 ENSG00000182871 ENST00000359759 protein_coding 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 CYYR1 ENSG00000166265 ENST00000652641 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 CYYR1-AS1 ENSG00000197934 ENST00000357401 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ENSG00000227698 ENSG00000227698 ENST00000432411 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ENSG00000249209 ENSG00000249209 ENST00000429238 protein_coding 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ENSG00000251778 ENSG00000251778 ENST00000515969 snoRNA 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ENSG00000273840 ENSG00000273840 ENST00000612267 0 1 0 1 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ENSG00000279690 ENSG00000279690 ENST00000624800 TEC 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ENSG00000281420 ENSG00000281420 ENST00000626421 pseudogene 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ENSG00000286153 ENSG00000286153 ENST00000651798 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ENSG00000289421 ENSG00000289421 ENST00000689761 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ERG ENSG00000157554 ENST00000398919 protein_coding 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ETS2 ENSG00000157557 ENST00000667466 protein_coding 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 GET1-SH3BGR ENSG00000285815 ENST00000647779 protein_coding 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 ICOSLG ENSG00000160223 ENST00000400379 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ITGB2 ENSG00000160255 ENST00000302347 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ITSN1 ENSG00000205726 ENST00000381318 protein_coding 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 KRTAP10-1 ENSG00000215455 ENST00000400375 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 KRTAP10-3 ENSG00000212935 ENST00000391620 protein_coding 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 KRTAP10-4 ENSG00000215454 ENST00000400374 protein_coding 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 KRTAP10-5 ENSG00000241123 ENST00000400372 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 KRTAP10-6 ENSG00000188155 ENST00000400368 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 KRTAP10-9 ENSG00000221837 ENST00000397911 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 KRTAP12-2 ENSG00000221864 ENST00000360770 protein_coding 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 KRTAP13-3 ENSG00000240432 ENST00000390690 protein_coding 0 1 3 1 0 0 0 0 0 0 0 0 0 3 0 0 0 1 1 KRTAP13-4 ENSG00000186971 ENST00000334068 protein_coding 0 0 1 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 KRTAP19-11P ENSG00000236612 ENST00000439851 unprocessed_pseudogene 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 KRTAP19-6 ENSG00000186925 ENST00000334046 protein_coding 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 LCA5L ENSG00000157578 ENST00000288350 protein_coding 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 LINC01426 ENSG00000234380 ENST00000420877 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 LTN1 ENSG00000198862 ENST00000614971 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 MIR6501 ENSG00000284448 ENST00000290239 miRNA 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 PCNT ENSG00000160299 ENST00000359568 protein_coding 0 0 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 PDXK ENSG00000160209 ENST00000291565 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 PRDM15 ENSG00000141956 ENST00000269844 protein_coding 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RIPPLY3 ENSG00000183145 ENST00000329553 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 RUNX1 ENSG00000159216 ENST00000300305 protein_coding 0 0 0 13 6 5 0 0 0 0 0 0 2 0 0 0 0 0 0 SAMSN1 ENSG00000155307 ENST00000647101 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 SH3BGR ENSG00000185437 ENST00000333634 protein_coding 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 SIM2 ENSG00000159263 ENST00000290399 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 SLC19A1 ENSG00000173638 ENST00000311124 protein_coding 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 SON ENSG00000159140 ENST00000356577 protein_coding 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 SYNJ1 ENSG00000159082 ENST00000433931 protein_coding 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 TMPRSS2 ENSG00000184012 ENST00000679263 protein_coding 0 0 0 24 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 TPTE ENSG00000274391 ENST00000618007 protein_coding 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 TRAPPC10 ENSG00000160218 ENST00000291574 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 TSPEAR ENSG00000175894 ENST00000323084 protein_coding 0 0 0 10 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 UMODL1 ENSG00000177398 ENST00000408989 protein_coding 0 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 UMODL1-AS1 ENSG00000184385 ENST00000329015 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 USP25 ENSG00000155313 ENST00000400183 protein_coding 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ZBTB21 ENSG00000173276 ENST00000310826 protein_coding 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0