Clear
Retried
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (HCC1395_BL) 4s 3s - - 3.2 MB 71% 136.3 KB 5.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (HCC1395_BL) 4s 3s - - 24.7 MB 8071% 153.0 KB 16.7 KB 0 bytes 24.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (HCC1395_BL) 5s 2s 2s 1s 274.0 MB 952% 38.8 MB 42.1 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_SUMMARY (HCC1395_BL) 6s 4s - - 10.4 MB 86% 85.3 KB 2.4 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_QUAL (HCC1395_BL) 5s 3s - - 9.9 MB 109% 85.0 KB 13.3 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (HCC1395_BL) 3s 1s - - 9.4 MB 115% 82.7 KB 2.3 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_BL) 4s 3s - - 17.7 MB 8286% 216.5 KB 42.2 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (HCC1395_BL) 4s 2s - - 3.2 MB 7435% 258.7 KB 42.5 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (HCC1395_BL) 28s 2s 23s 3s 2.5 GB 297% 170.9 MB 3.6 MB 0 bytes 748.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL) 4s 3s - - 3.3 MB 93% 544.0 KB 59.3 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (HCC1395_BL) 15s 3s 1s 11s 270.2 MB 198% 65.2 MB 1.8 MB 82.6 MB 144.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (HCC1395_BL) 4s 3s - - 3.2 MB 134% 218.6 KB 5.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_TO_BAM (HCC1395_BL) 21s 3s 8s 10s 536.6 MB 184% 3.1 GB 99.3 MB 0 bytes 99.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (HCC1395_BL) 4s 3s - - 3.3 MB 67% 137.4 KB 5.0 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (HCC1395_BL) 3m 0s 7s 2m 38s 14s 64.0 GB 1301% 5.3 GB 83.3 MB 0 bytes 19.5 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (HCC1395_BL) 2m 53s 7s 2m 31s 14s 64.0 GB 1299% 5.3 GB 83.2 MB 0 bytes 19.4 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (HCC1395_BL) 2m 36s 7s 2m 14s 14s 64.0 GB 1293% 5.3 GB 83.4 MB 0 bytes 19.6 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (HCC1395_BL) 3m 0s 7s 2m 39s 13s 64.0 GB 1305% 5.3 GB 83.2 MB 0 bytes 19.4 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (HCC1395_BL) 4m 0s 1m 31s 2m 17s 11s 64.0 GB 1289% 5.3 GB 83.1 MB 0 bytes 19.4 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (HCC1395_BL) 2m 52s 7s 2m 30s 14s 64.0 GB 1298% 5.3 GB 83.3 MB 0 bytes 19.5 MB 1
168 items found |
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