|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (HCC1395_BL)
|
4s |
3s |
- |
- |
3.2 MB |
71% |
136.3 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (Sig_18_Blood)
|
4s |
2s |
- |
- |
3.1 MB |
67% |
128.4 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (Sig_18_Blood)
|
5s |
3s |
- |
- |
3.2 MB |
140% |
117.2 KB |
3.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (Sig_18_Blood)
|
4s |
3s |
- |
- |
3.3 MB |
64% |
139.6 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (Sig_18_Blood)
|
3s |
2s |
- |
- |
3.3 MB |
70% |
117.2 KB |
3.4 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (Sig_18_Blood)
|
4s |
3s |
- |
- |
3.3 MB |
149% |
138.3 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_VARIANT_FILTERING_GATK:CNNSCOREVARIANTS (HCC1395_BL)
|
1m 7s |
50s |
8s |
8s |
1.1 GB |
352% |
198.0 MB |
20.2 MB |
0 bytes |
20.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_VARIANT_FILTERING_GATK:CNNSCOREVARIANTS (Sig_18_Blood)
|
48s |
32s |
6s |
9s |
967.6 MB |
413% |
196.1 MB |
20.2 MB |
0 bytes |
20.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_VARIANT_FILTERING_GATK:FILTERVARIANTTRANCHES (HCC1395_BL)
|
28s |
2s |
5s |
21s |
980.4 MB |
256% |
130.7 MB |
745.6 KB |
0 bytes |
764.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_VARIANT_FILTERING_GATK:FILTERVARIANTTRANCHES (Sig_18_Blood)
|
32s |
4s |
6s |
22s |
1014.1 MB |
259% |
129.3 MB |
748.1 KB |
0 bytes |
768.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_tumor_vs_HCC1395_BL)
|
1m 17s |
12s |
55s |
10s |
4.0 GB |
207% |
6.9 GB |
371.5 MB |
0 bytes |
371.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (Sig_18_tissue_vs_Sig_18_Blood)
|
1m 58s |
12s |
1m 37s |
9s |
4.0 GB |
187% |
9.8 GB |
669.1 MB |
0 bytes |
669.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (HCC1395_tumor_vs_HCC1395_BL)
|
19s |
15s |
3s |
1s |
129.9 MB |
682% |
75.3 MB |
68.3 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (Sig_18_tissue_vs_Sig_18_Blood)
|
7s |
3s |
3s |
1s |
132.2 MB |
552% |
75.3 MB |
68.3 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_EXPORT (HCC1395_tumor_vs_HCC1395_BL)
|
17s |
13s |
3s |
1s |
137.5 MB |
957% |
75.3 MB |
69.6 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_EXPORT (Sig_18_tissue_vs_Sig_18_Blood)
|
15s |
11s |
3s |
1s |
135.6 MB |
911% |
75.3 MB |
69.3 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_GENEMETRICS (HCC1395_tumor_vs_HCC1395_BL)
|
19s |
15s |
3s |
1s |
131.3 MB |
568% |
75.4 MB |
68.0 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_GENEMETRICS (Sig_18_tissue_vs_Sig_18_Blood)
|
17s |
13s |
3s |
1s |
131.5 MB |
892% |
75.4 MB |
68.0 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_ASCAT:ASCAT (HCC1395_tumor_vs_HCC1395_BL)
|
1m 3s |
13s |
38s |
12s |
1.6 GB |
239% |
12.6 GB |
112.5 MB |
0 bytes |
112.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_ASCAT:ASCAT (Sig_18_tissue_vs_Sig_18_Blood)
|
1m 15s |
13s |
49s |
13s |
2.0 GB |
213% |
12.7 GB |
112.4 MB |
0 bytes |
112.4 MB |
1 |