succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SAMTOOLS_CONVERT_CRAM_TO_BAM (HCC1395_tumor_vs_HCC1395_BL_normal) 20s 3s 4s 13s 97.8 MB 213% 220.3 MB 106.8 MB 0 bytes 106.9 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SAMTOOLS_CONVERT_CRAM_TO_BAM (HCC1395_tumor_vs_HCC1395_BL_tumor) 26s 4s 9s 13s 106.4 MB 217% 478.1 MB 262.5 MB 0 bytes 262.7 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SAMTOOLS_CONVERT_CRAM_TO_BAM (Sig_18_tissue_vs_Sig_18_Blood_normal) 19s 2s 5s 12s 98.0 MB 214% 262.3 MB 132.5 MB 0 bytes 132.6 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SAMTOOLS_CONVERT_CRAM_TO_BAM (Sig_18_tissue_vs_Sig_18_Blood_tumor) 33s 2s 21s 10s 109.8 MB 217% 906.8 MB 534.3 MB 4.0 KB 534.8 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (HCC1395_tumor_vs_HCC1395_BL) 34s 31s 2s 0s 341.9 MB 822% 41.8 MB 5.1 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (Sig_18_tissue_vs_Sig_18_Blood) 6s 2s 2s 1s 347.4 MB 857% 41.8 MB 5.0 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL) 49s 36s 11s 1s 1.2 GB 300% 77.4 MB 11.0 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (Sig_18_tissue_vs_Sig_18_Blood) 17s 3s 12s 1s 1.0 GB 294% 77.5 MB 11.1 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:WHATSHAP_MUTECT2 (HCC1395_tumor_vs_HCC1395_BL) 43s 8s 26s 9s 155.2 MB 100% 315.6 MB 30.2 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:WHATSHAP_MUTECT2 (Sig_18_tissue_vs_Sig_18_Blood) 1m 22s 2s 1m 9s 11s 191.3 MB 100% 471.9 MB 33.5 KB 0 bytes 36.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (HCC1395_BL) 27s 6s 11s 10s 164.2 MB 289% 3.2 GB 809.6 KB 2.4 GB 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (HCC1395_tumor) 28s 5s 11s 12s 168.4 MB 338% 3.3 GB 817.7 KB 1.8 GB 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (Sig_18_Blood) 24s 4s 11s 9s 161.8 MB 295% 3.2 GB 810.0 KB 3.1 GB 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (Sig_18_tissue) 30s 3s 18s 9s 161.6 MB 235% 3.4 GB 818.0 KB 2.0 GB 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:NGSCHECKMATE_NCM (1) 19s 10s - - 3.2 MB 2950% 12.0 MB 829.5 KB 0 bytes 868.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (HCC1395_BL) 21s 4s 8s 9s 264.2 MB 107% 3.1 GB 3.6 MB 0 bytes 3.6 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (HCC1395_tumor) 24s 2s 9s 13s 243.7 MB 117% 3.2 GB 5.0 MB 0 bytes 5.1 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (Sig_18_Blood) 21s 3s 9s 9s 236.5 MB 108% 3.1 GB 4.1 MB 0 bytes 4.1 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (Sig_18_tissue) 23s 2s 12s 9s 262.1 MB 136% 3.3 GB 6.4 MB 0 bytes 6.5 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (HCC1395_BL) 20s 2s 10s 8s 100.6 MB 109% 3.1 GB 283.5 KB 3.1 GB 288.0 KB 1
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