|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_BL)
|
6s |
2s |
3s |
1s |
211.9 MB |
335% |
95.6 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_tumor)
|
7s |
3s |
2s |
2s |
238.7 MB |
350% |
95.6 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (Sig_18_Blood)
|
7s |
3s |
3s |
1s |
217.7 MB |
346% |
95.6 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (Sig_18_tissue)
|
6s |
3s |
3s |
0s |
237.2 MB |
345% |
95.6 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:CALCULATECONTAMINATION (HCC1395_BL)
|
6s |
2s |
3s |
1s |
282.8 MB |
281% |
95.4 MB |
692.0 KB |
0 bytes |
700.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:CALCULATECONTAMINATION (Sig_18_Blood)
|
8s |
3s |
4s |
1s |
220.1 MB |
287% |
95.4 MB |
692.0 KB |
0 bytes |
700.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:FILTERMUTECTCALLS (HCC1395_BL)
|
16s |
3s |
3s |
10s |
369.1 MB |
340% |
153.1 MB |
744.5 KB |
0 bytes |
756.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:FILTERMUTECTCALLS (Sig_18_Blood)
|
18s |
5s |
4s |
9s |
339.5 MB |
323% |
154.7 MB |
744.7 KB |
0 bytes |
756.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:GATHERPILEUPSUMMARIES (HCC1395_BL)
|
7s |
3s |
3s |
1s |
280.0 MB |
282% |
95.7 MB |
710.7 KB |
0 bytes |
712.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:GATHERPILEUPSUMMARIES (Sig_18_Blood)
|
7s |
3s |
3s |
1s |
259.9 MB |
278% |
95.7 MB |
710.8 KB |
0 bytes |
712.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:GETPILEUPSUMMARIES (HCC1395_BL)
|
20s |
3s |
7s |
10s |
740.6 MB |
289% |
166.9 MB |
701.4 KB |
0 bytes |
712.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:GETPILEUPSUMMARIES (HCC1395_BL)
|
30s |
3s |
13s |
14s |
768.9 MB |
193% |
224.5 MB |
706.4 KB |
0 bytes |
720.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:GETPILEUPSUMMARIES (Sig_18_Blood)
|
20s |
4s |
6s |
10s |
655.8 MB |
270% |
170.5 MB |
701.6 KB |
0 bytes |
712.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:GETPILEUPSUMMARIES (Sig_18_Blood)
|
30s |
3s |
17s |
10s |
762.9 MB |
175% |
237.1 MB |
706.4 KB |
0 bytes |
720.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:LEARNREADORIENTATIONMODEL (HCC1395_BL)
|
9s |
2s |
6s |
1s |
555.7 MB |
213% |
96.1 MB |
1.2 MB |
0 bytes |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:LEARNREADORIENTATIONMODEL (Sig_18_Blood)
|
9s |
2s |
6s |
1s |
553.8 MB |
226% |
96.1 MB |
1.2 MB |
0 bytes |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:MERGE_MUTECT2 (HCC1395_BL)
|
7s |
3s |
3s |
1s |
258.3 MB |
311% |
95.9 MB |
722.8 KB |
0 bytes |
732.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:MERGE_MUTECT2 (Sig_18_Blood)
|
9s |
4s |
4s |
1s |
274.6 MB |
295% |
95.9 MB |
723.0 KB |
0 bytes |
732.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:MERGEMUTECTSTATS (HCC1395_BL)
|
6s |
2s |
2s |
2s |
288.6 MB |
267% |
95.1 MB |
691.1 KB |
0 bytes |
696.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:MERGEMUTECTSTATS (Sig_18_Blood)
|
6s |
2s |
3s |
1s |
259.0 MB |
269% |
95.1 MB |
691.1 KB |
0 bytes |
696.0 KB |
1 |