File Info
- Filename
- Sig_18_tissue_vs_Sig_18_Blood.mutect2.whatshap.phased_custom.ann_snpEff.genes.txt
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-data-01/users/mipeters/semiproductionize/sarek/698115e9/test_regression_infra_70d9bc7c/reports/raw_qc/snpeff/mutect2/Sig_18_tissue_vs_Sig_18_Blood/Sig_18_tissue_vs_Sig_18_Blood.mutect2.whatshap.phased_custom.ann_snpEff.genes.txt
- Size
- 4.7 KB
- Workflow Run
- mipeters-regression-infra-698115e9
- Published
- Feb 02, 2026 1:51 PM
Content
View in new tab# The following table is formatted as tab separated values. #GeneName GeneId TranscriptId BioType variants_impact_HIGH variants_impact_LOW variants_impact_MODERATE variants_impact_MODIFIER variants_effect_3_prime_UTR_variant variants_effect_5_prime_UTR_variant variants_effect_conservative_inframe_deletion variants_effect_disruptive_inframe_deletion variants_effect_downstream_gene_variant variants_effect_frameshift_variant variants_effect_intron_variant variants_effect_missense_variant variants_effect_non_coding_transcript_exon_variant variants_effect_synonymous_variant variants_effect_upstream_gene_variant ADAMTS1 ENSG00000154734 ENST00000284984 protein_coding 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 APP ENSG00000142192 ENST00000346798 protein_coding 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 BAGE2 ENSG00000187172 ENST00000496773 transcribed_unprocessed_pseudogene 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 BRWD1 ENSG00000185658 ENST00000333229 protein_coding 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 C21orf58 ENSG00000160298 ENST00000291691 protein_coding 0 1 2 1 0 0 1 1 0 0 0 0 0 1 1 C2CD2 ENSG00000157617 ENST00000380486 protein_coding 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 CFAP410 ENSG00000160226 ENST00000397956 protein_coding 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 CLIC6 ENSG00000159212 ENST00000360731 protein_coding 0 0 2 0 0 0 0 1 0 0 0 1 0 0 0 COL18A1 ENSG00000182871 ENST00000359759 protein_coding 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 DONSON ENSG00000159147 ENST00000303071 protein_coding 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 DYRK1A ENSG00000157540 ENST00000398960 protein_coding 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 ENSG00000184441 ENSG00000184441 ENST00000448927 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 ENSG00000227757 ENSG00000227757 ENST00000454622 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 ENSG00000237594 ENSG00000237594 ENST00000433071 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 ENSG00000241728 ENSG00000241728 ENST00000422357 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 ENSG00000249209 ENSG00000249209 ENST00000429238 protein_coding 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 ENSG00000272991 ENSG00000272991 ENST00000608767 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 ENSG00000273271 ENSG00000273271 ENST00000609934 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 ENSG00000273840 ENSG00000273840 ENST00000612267 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 ENSG00000286153 ENSG00000286153 ENST00000651798 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 ENSG00000286224 ENSG00000286224 ENST00000652508 protein_coding 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 GRIK1 ENSG00000171189 ENST00000327783 protein_coding 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 ICOSLG ENSG00000160223 ENST00000400379 protein_coding 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 IGSF5 ENSG00000183067 ENST00000380588 protein_coding 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 KRTAP10-2 ENSG00000205445 ENST00000391621 protein_coding 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 KRTAP10-6 ENSG00000188155 ENST00000400368 protein_coding 0 5 1 0 0 0 0 0 0 0 0 1 0 5 0 KRTAP21-1 ENSG00000187005 ENST00000335093 protein_coding 0 0 2 0 0 0 0 1 0 0 0 1 0 0 0 LINC00205 ENSG00000223768 ENST00000400362 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 LINC01426 ENSG00000234380 ENST00000420877 0 0 0 7 0 0 0 0 7 0 0 0 0 0 0 MIR6501 ENSG00000284448 ENST00000290239 miRNA 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 OLIG1 ENSG00000184221 ENST00000382348 protein_coding 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 PCNT ENSG00000160299 ENST00000359568 protein_coding 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 PFKL ENSG00000141959 ENST00000349048 protein_coding 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 POFUT2 ENSG00000186866 ENST00000349485 protein_coding 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 PRDM15 ENSG00000141956 ENST00000269844 protein_coding 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 PSMG1 ENSG00000183527 ENST00000331573 protein_coding 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 PTTG1IP ENSG00000183255 ENST00000330938 protein_coding 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 RIPPLY3 ENSG00000183145 ENST00000329553 protein_coding 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 RUNX1 ENSG00000159216 ENST00000300305 protein_coding 0 0 0 16 7 7 0 0 0 0 2 0 0 0 0 SCAF4 ENSG00000156304 ENST00000286835 protein_coding 0 0 3 0 0 0 0 2 0 0 0 1 0 0 0 SLC19A1 ENSG00000173638 ENST00000311124 protein_coding 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 SOD1 ENSG00000142168 ENST00000270142 protein_coding 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 SON ENSG00000159140 ENST00000356577 protein_coding 0 2 2 1 0 0 0 2 1 0 0 0 0 2 0 TIAM1 ENSG00000156299 ENST00000286827 protein_coding 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 TMPRSS2 ENSG00000184012 ENST00000679263 protein_coding 0 0 0 36 0 0 0 0 0 0 36 0 0 0 0 TPTE ENSG00000274391 ENST00000618007 protein_coding 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 TSPEAR ENSG00000175894 ENST00000323084 protein_coding 0 0 0 8 0 0 0 0 0 0 8 0 0 0 0 UBE2G2 ENSG00000184787 ENST00000345496 protein_coding 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 UMODL1 ENSG00000177398 ENST00000408989 protein_coding 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 UMODL1-AS1 ENSG00000184385 ENST00000329015 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 YBEY ENSG00000182362 ENST00000329319 protein_coding 0 0 0 3 0 0 0 0 3 0 0 0 0 0 0