|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (HCC1395_BL;strelka)
|
5s |
4s |
- |
- |
3.3 MB |
64% |
134.8 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (HCC1395_BL;strelka)
|
3s |
2s |
- |
- |
3.3 MB |
69% |
127.8 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (HCC1395_BL;strelka)
|
4s |
3s |
- |
- |
20.1 MB |
5740% |
144.3 KB |
9.2 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (HCC1395_BL;strelka)
|
5s |
3s |
- |
- |
11.7 MB |
120% |
76.9 KB |
3.8 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_SUMMARY (HCC1395_BL;strelka)
|
5s |
2s |
- |
- |
9.9 MB |
123% |
76.8 KB |
4.1 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_QUAL (HCC1395_BL;strelka)
|
5s |
3s |
- |
- |
10.2 MB |
124% |
76.9 KB |
12.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (HCC1395_BL;strelka)
|
6s |
3s |
1s |
2s |
313.9 MB |
1031% |
38.8 MB |
33.9 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_BL;strelka)
|
4s |
2s |
- |
- |
17.5 MB |
8187% |
200.2 KB |
34.2 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (HCC1395_BL;strelka)
|
4s |
3s |
- |
- |
16.4 MB |
9242% |
242.8 KB |
34.4 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (HCC1395_BL;strelka)
|
34s |
7s |
24s |
3s |
2.8 GB |
308% |
170.9 MB |
3.5 MB |
0 bytes |
660.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;strelka)
|
4s |
3s |
- |
- |
3.2 MB |
90% |
453.8 KB |
51.1 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (HCC1395_BL;strelka)
|
15s |
3s |
1s |
11s |
281.0 MB |
194% |
66.1 MB |
1.6 MB |
81.9 MB |
132.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (HCC1395_BL;strelka)
|
3s |
2s |
- |
- |
3.3 MB |
72% |
207.5 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |