|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (HCC1395_tumor)
|
26s |
3s |
13s |
10s |
130.6 MB |
152% |
333.9 MB |
170.2 MB |
0 bytes |
170.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_Blood)
|
20s |
4s |
6s |
10s |
127.8 MB |
140% |
174.0 MB |
84.4 MB |
0 bytes |
84.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_tissue)
|
40s |
4s |
26s |
10s |
132.8 MB |
152% |
756.0 MB |
327.0 MB |
0 bytes |
327.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_44120631-44120778)
|
24s |
3s |
11s |
10s |
931.0 MB |
232% |
195.5 MB |
22.3 MB |
0 bytes |
22.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_5117103-5117231)
|
39s |
2s |
28s |
9s |
838.2 MB |
161% |
218.8 MB |
80.9 MB |
0 bytes |
81.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_44120631-44120778)
|
35s |
2s |
23s |
10s |
776.9 MB |
165% |
210.2 MB |
71.1 MB |
0 bytes |
71.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_5117103-5117231)
|
1m 27s |
13s |
1m 5s |
9s |
818.3 MB |
129% |
263.7 MB |
218.5 MB |
0 bytes |
218.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_44120631-44120778)
|
25s |
3s |
13s |
9s |
846.4 MB |
222% |
197.3 MB |
27.4 MB |
0 bytes |
27.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_5117103-5117231)
|
46s |
3s |
33s |
10s |
791.0 MB |
153% |
226.7 MB |
102.3 MB |
0 bytes |
102.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_44120631-44120778)
|
55s |
3s |
42s |
10s |
779.4 MB |
146% |
229.0 MB |
132.9 MB |
0 bytes |
132.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_5117103-5117231)
|
2m 52s |
2s |
2m 39s |
11s |
856.8 MB |
116% |
387.9 MB |
578.9 MB |
0 bytes |
579.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_44120631-44120778)
|
1m 32s |
55s |
16s |
21s |
1018.4 MB |
209% |
167.6 MB |
801.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_5117103-5117231)
|
1m 44s |
55s |
29s |
20s |
1015.0 MB |
163% |
238.6 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_44120631-44120778)
|
1m 19s |
35s |
25s |
19s |
1.0 GB |
167% |
182.3 MB |
801.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_5117103-5117231)
|
1m 41s |
36s |
46s |
19s |
1.3 GB |
136% |
283.5 MB |
802.9 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_44120631-44120778)
|
1m 22s |
46s |
16s |
20s |
1.1 GB |
199% |
169.3 MB |
801.5 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_5117103-5117231)
|
1m 37s |
45s |
34s |
18s |
1.9 GB |
155% |
246.5 MB |
802.8 KB |
32.1 MB |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_44120631-44120778)
|
52s |
14s |
28s |
10s |
873.9 MB |
169% |
201.0 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_5117103-5117231)
|
2m 7s |
13s |
1m 43s |
11s |
1.4 GB |
120% |
407.7 MB |
803.6 KB |
0 bytes |
840.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_BL)
|
6s |
2s |
3s |
1s |
242.4 MB |
342% |
95.6 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |