|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_SOMATIC (Sig_18_Blood;mutect2)
|
5s |
4s |
- |
- |
3.3 MB |
132% |
136.7 KB |
3.7 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_BL;mutect2)
|
4s |
2s |
- |
- |
16.2 MB |
8585% |
194.9 KB |
29.6 KB |
0 bytes |
40.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (Sig_18_Blood;mutect2)
|
5s |
3s |
- |
- |
3.2 MB |
7974% |
195.1 KB |
29.8 KB |
0 bytes |
40.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (HCC1395_BL;mutect2)
|
4s |
2s |
- |
- |
3.2 MB |
8809% |
237.3 KB |
29.9 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (Sig_18_Blood;mutect2)
|
4s |
2s |
- |
- |
3.2 MB |
7916% |
237.5 KB |
30.1 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (HCC1395_BL;mutect2)
|
34s |
13s |
9s |
12s |
282.6 MB |
102% |
3.1 GB |
943.7 KB |
1.9 GB |
236.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (Sig_18_Blood;mutect2)
|
23s |
3s |
9s |
11s |
286.2 MB |
102% |
3.1 GB |
932.0 KB |
1.7 GB |
236.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (HCC1395_BL;mutect2)
|
3s |
2s |
- |
- |
3.3 MB |
72% |
146.1 KB |
3.8 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (Sig_18_Blood;mutect2)
|
4s |
3s |
- |
- |
3.3 MB |
72% |
146.0 KB |
3.9 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (HCC1395_BL;mutect2)
|
5s |
2s |
1s |
2s |
304.8 MB |
1262% |
38.8 MB |
29.5 KB |
0 bytes |
40.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (Sig_18_Blood;mutect2)
|
6s |
3s |
1s |
2s |
301.2 MB |
1112% |
38.8 MB |
29.7 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (HCC1395_BL;mutect2)
|
29s |
2s |
24s |
3s |
2.8 GB |
291% |
170.9 MB |
3.3 MB |
0 bytes |
456.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (Sig_18_Blood;mutect2)
|
35s |
9s |
24s |
2s |
2.8 GB |
322% |
170.9 MB |
3.4 MB |
0 bytes |
500.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;mutect2)
|
5s |
4s |
- |
- |
3.3 MB |
110% |
366.3 KB |
36.4 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (Sig_18_Blood;mutect2)
|
4s |
3s |
- |
- |
3.3 MB |
58% |
365.9 KB |
36.5 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (HCC1395_BL)
|
11s |
8s |
1s |
1s |
332.8 MB |
1156% |
16.6 MB |
57.1 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (Sig_18_Blood)
|
14s |
11s |
1s |
1s |
342.6 MB |
1001% |
16.6 MB |
56.7 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (HCC1395_BL)
|
9s |
8s |
0s |
0s |
13.8 MB |
4228% |
11.2 MB |
56.7 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (Sig_18_Blood)
|
9s |
8s |
0s |
0s |
14.0 MB |
4122% |
11.2 MB |
56.3 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_SOMATIC (HCC1395_BL)
|
9s |
7s |
0s |
1s |
13.7 MB |
4289% |
11.3 MB |
57.5 KB |
0 bytes |
64.0 KB |
1 |