|
succeeded
|
NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (HCC1395_tumor)
|
47s |
2s |
32s |
12s |
530.1 MB |
492% |
5.1 GB |
736.5 MB |
0 bytes |
780.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (Sig_18_Blood)
|
37s |
3s |
22s |
11s |
414.8 MB |
506% |
4.2 GB |
362.8 MB |
0 bytes |
409.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (Sig_18_tissue)
|
1m 19s |
2s |
1m 2s |
14s |
787.8 MB |
459% |
7.8 GB |
1.7 GB |
0 bytes |
1.7 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_BL)
|
1m 32s |
56s |
27s |
9s |
3.9 GB |
149% |
4.3 GB |
108.2 MB |
0 bytes |
108.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (Sig_18_Blood)
|
1m 38s |
58s |
31s |
9s |
3.9 GB |
151% |
4.6 GB |
133.9 MB |
0 bytes |
133.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_GERMLINE_MANTA:MANTA_GERMLINE (HCC1395_BL)
|
47s |
4s |
34s |
9s |
89.0 MB |
134% |
3.2 GB |
3.2 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_GERMLINE_MANTA:MANTA_GERMLINE (Sig_18_Blood)
|
47s |
4s |
34s |
9s |
93.0 MB |
141% |
3.0 GB |
3.2 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (HCC1395_BL;chr21_44120631-44120778)
|
32s |
3s |
10s |
19s |
870.9 MB |
335% |
175.0 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (HCC1395_BL;chr21_5117103-5117231)
|
59s |
3s |
37s |
19s |
1021.6 MB |
253% |
270.2 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (Sig_18_Blood;chr21_44120631-44120778)
|
40s |
3s |
17s |
20s |
892.7 MB |
297% |
177.6 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (Sig_18_Blood;chr21_5117103-5117231)
|
1m 22s |
2s |
1m 2s |
18s |
1.1 GB |
247% |
281.7 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:MERGE_HAPLOTYPECALLER (HCC1395_BL)
|
7s |
2s |
3s |
2s |
230.0 MB |
314% |
95.9 MB |
737.1 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:MERGE_HAPLOTYPECALLER (Sig_18_Blood)
|
7s |
3s |
3s |
1s |
241.7 MB |
311% |
95.9 MB |
739.6 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (HCC1395_BL)
|
7s |
2s |
3s |
2s |
238.9 MB |
297% |
95.9 MB |
734.5 KB |
0 bytes |
740.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (Sig_18_Blood)
|
8s |
3s |
3s |
2s |
220.8 MB |
323% |
95.9 MB |
737.2 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (HCC1395_BL;chr21_44120631-44120778)
|
14s |
2s |
2s |
9s |
340.7 MB |
352% |
128.9 MB |
100.0 KB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (HCC1395_BL;chr21_5117103-5117231)
|
17s |
2s |
5s |
9s |
523.3 MB |
624% |
612.0 MB |
173.3 KB |
0 bytes |
6.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (Sig_18_Blood;chr21_44120631-44120778)
|
16s |
4s |
2s |
9s |
362.9 MB |
442% |
137.5 MB |
98.2 KB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (Sig_18_Blood;chr21_5117103-5117231)
|
23s |
3s |
10s |
9s |
570.8 MB |
707% |
640.2 MB |
181.0 KB |
0 bytes |
6.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (HCC1395_BL)
|
7s |
3s |
2s |
2s |
224.7 MB |
348% |
96.1 MB |
1.0 MB |
0 bytes |
1.0 MB |
1 |