|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (Sig_18_Blood)
|
8s |
3s |
3s |
2s |
236.2 MB |
348% |
96.2 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (HCC1395_BL)
|
7s |
3s |
2s |
2s |
212.3 MB |
313% |
95.9 MB |
728.3 KB |
0 bytes |
736.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (Sig_18_Blood)
|
6s |
2s |
3s |
1s |
217.9 MB |
318% |
95.9 MB |
729.3 KB |
0 bytes |
736.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (HCC1395_BL;chr21_44120631-44120778.bed)
|
30s |
2s |
19s |
9s |
77.3 MB |
34% |
123.6 MB |
2.7 MB |
0 bytes |
1.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (HCC1395_BL;chr21_5117103-5117231.bed)
|
46s |
4s |
34s |
8s |
258.8 MB |
84% |
984.3 MB |
4.9 MB |
0 bytes |
2.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (Sig_18_Blood;chr21_44120631-44120778.bed)
|
31s |
2s |
19s |
10s |
79.8 MB |
40% |
124.0 MB |
2.9 MB |
0 bytes |
1.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (Sig_18_Blood;chr21_5117103-5117231.bed)
|
47s |
4s |
33s |
10s |
253.6 MB |
99% |
937.7 MB |
5.7 MB |
0 bytes |
3.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:CNNSCOREVARIANTS (HCC1395_BL)
|
19s |
3s |
6s |
9s |
1.0 GB |
399% |
198.1 MB |
20.2 MB |
0 bytes |
20.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:CNNSCOREVARIANTS (Sig_18_Blood)
|
19s |
3s |
6s |
9s |
985.7 MB |
388% |
196.1 MB |
20.2 MB |
0 bytes |
20.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:FILTERVARIANTTRANCHES (HCC1395_BL)
|
31s |
3s |
6s |
22s |
1.1 GB |
252% |
130.7 MB |
743.3 KB |
0 bytes |
764.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:FILTERVARIANTTRANCHES (Sig_18_Blood)
|
33s |
3s |
5s |
25s |
1000.9 MB |
253% |
129.3 MB |
746.0 KB |
0 bytes |
768.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (HCC1395_BL;haplotypecaller)
|
3s |
2s |
- |
- |
3.2 MB |
68% |
144.0 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (HCC1395_BL;manta)
|
5s |
3s |
- |
- |
3.3 MB |
127% |
120.1 KB |
3.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (HCC1395_BL;sentieon_haplotyper)
|
4s |
2s |
- |
- |
3.1 MB |
142% |
143.9 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (HCC1395_BL;strelka)
|
5s |
4s |
- |
- |
3.3 MB |
64% |
134.8 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (Sig_18_Blood;haplotypecaller)
|
4s |
2s |
- |
- |
3.2 MB |
70% |
148.7 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (Sig_18_Blood;manta)
|
5s |
4s |
- |
- |
3.3 MB |
64% |
120.2 KB |
3.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (Sig_18_Blood;sentieon_haplotyper)
|
4s |
3s |
- |
- |
3.3 MB |
71% |
146.6 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (Sig_18_Blood;strelka)
|
4s |
2s |
- |
- |
3.1 MB |
68% |
135.6 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (HCC1395_BL)
|
4s |
3s |
0s |
0s |
31.7 MB |
4568% |
202.2 KB |
1.2 KB |
0 bytes |
8.0 KB |
1 |