#SAMPLE=1029_BG5_1029_BG5-T1-TDNA-1_23FC2GLT4_s29 context rev_comp f1r2_a f1r2_c f1r2_g f1r2_t f2r1_a f2r1_c f2r1_g f2r1_t hom_ref germline_het somatic_het hom_var num_examples num_alt_examples AAA TTT 0 8.90693e-07 1.96166e-06 9.69531e-08 0 7.7897e-08 5.54024e-07 1.28656e-07 0.999186 4.82975e-06 0.000656169 0.000149721 1430193 3868 AAC GTT 0 1.69214e-07 1.47389e-06 1.26025e-07 0 1.57591e-06 1.99437e-06 1.83495e-07 0.998805 1.50565e-05 0.000888904 0.000285121 868539 2684 AAG CTT 0 8.27933e-08 6.15272e-06 9.94778e-08 0 7.82316e-08 8.69704e-06 3.32019e-07 0.998605 5.3214e-06 0.0011582 0.000215604 1408273 5873 AAT ATT 0 1.19639e-06 4.91896e-07 1.18589e-07 0 1.58579e-07 3.2322e-07 1.59182e-07 0.998856 2.29944e-05 0.000858491 0.0002597 977300 2885 ACA TGT 1.62448e-06 0 1.03154e-07 0.000114438 1.00748e-06 0 9.46485e-08 2.09978e-05 0.997337 2.62995e-06 0.00230599 0.000216567 1211958 8744 ACC GGT 1.37808e-06 0 1.26206e-07 0.000137537 1.24513e-06 0 1.15044e-07 6.41459e-06 0.997818 3.63687e-06 0.00184833 0.000182973 1007477 6407 ACG CGT 3.55627e-07 0 2.48743e-07 0.000498511 3.7984e-07 0 2.64153e-07 0.000135522 0.991941 0.000201799 0.00600324 0.00121877 429285 6000 ACT AGT 5.37438e-07 0 1.34381e-07 8.68614e-05 7.75267e-07 0 1.14496e-07 2.61957e-06 0.997642 5.00474e-06 0.00195621 0.000305523 978575 6210 AGA TCT 3.44293e-06 8.14796e-08 0 2.37712e-06 1.55235e-05 8.36115e-08 0 7.68915e-07 0.998345 3.29845e-06 0.00148506 0.000143991 1458811 7385 AGC GCT 2.46401e-05 8.21767e-08 0 2.59239e-06 0.000177195 8.67198e-08 0 3.0718e-07 0.997878 1.65029e-06 0.00176439 0.000151153 1433031 9037 AGG CCT 3.90248e-06 7.25653e-08 0 5.15182e-06 5.30791e-05 6.99084e-08 0 1.37243e-05 0.997811 2.89207e-06 0.00194071 0.000169757 1557775 10595 AGT ACT 2.61957e-06 1.14496e-07 0 7.75267e-07 8.68614e-05 1.34381e-07 0 5.37438e-07 0.997642 5.00474e-06 0.00195621 0.000305523 978575 6210 ATA TAT 7.33158e-07 5.0618e-07 1.73816e-07 0 2.94723e-07 6.29121e-07 1.58699e-07 0 0.99849 2.50346e-05 0.00114316 0.000338944 687766 2501 ATC GAT 1.46438e-07 2.69965e-06 1.24645e-07 0 1.16198e-07 1.05145e-06 1.09673e-07 0 0.999081 8.15792e-06 0.000710886 0.000195637 989351 2950 ATG CAT 9.81153e-07 6.08209e-07 5.54681e-07 0 9.09292e-08 5.8826e-07 9.13999e-08 0 0.998216 6.13968e-05 0.00118256 0.000537201 1237278 4412 ATT AAT 1.59182e-07 3.2322e-07 1.58579e-07 0 1.18589e-07 4.91896e-07 1.19639e-06 0 0.998856 2.29944e-05 0.000858491 0.0002597 977300 2885 CAA TTG 0 1.10146e-07 2.1715e-06 9.36086e-08 0 1.04999e-07 2.88088e-06 1.4021e-07 0.998685 9.12061e-06 0.00100336 0.000296664 1184577 4045 CAC GTG 0 9.68071e-08 2.35475e-06 9.72297e-08 0 1.09283e-07 1.07814e-06 1.81472e-07 0.998507 2.74146e-05 0.00103711 0.000424803 1238342 4265 CAG CTG 0 5.56683e-08 3.13859e-05 6.88541e-08 0 5.63287e-08 3.00291e-05 2.91819e-07 0.998024 9.9451e-06 0.00152055 0.000383609 2020139 9821 CAT ATG 0 9.13999e-08 5.8826e-07 9.09292e-08 0 5.54681e-07 6.08209e-07 9.81153e-07 0.998216 6.13968e-05 0.00118256 0.000537201 1237278 4412 CCA TGG 5.16496e-05 0 2.55261e-07 7.93226e-05 1.94726e-06 0 6.54727e-08 5.0278e-06 0.997848 8.53703e-07 0.00189806 0.000114336 1726616 11512 CCC GGG 7.30057e-06 0 8.09716e-08 0.000182028 1.51644e-06 0 8.12457e-08 1.60576e-06 0.997831 2.19593e-06 0.00181046 0.000163261 1377761 8784 CCG CGG 4.20011e-06 0 1.53458e-07 0.000367964 4.86386e-06 0 1.69846e-07 5.58807e-05 0.99352 8.23172e-05 0.00513596 0.000828185 739996 9566 CCT AGG 1.37243e-05 0 6.99084e-08 5.30791e-05 5.15182e-06 0 7.25653e-08 3.90248e-06 0.997811 2.89207e-06 0.00194071 0.000169757 1557775 10595 CGA TCG 7.072e-05 2.50577e-07 0 9.04025e-07 0.000424714 2.41143e-07 0 1.1364e-06 0.994664 5.14695e-05 0.00419916 0.000587594 451778 4856 CGC GCG 0.000721457 1.79999e-07 0 6.28442e-07 0.000662268 1.7528e-07 0 2.49054e-07 0.993604 3.59783e-05 0.00431434 0.00066049 633903 8027 CGG CCG 5.58807e-05 1.69846e-07 0 4.86386e-06 0.000367964 1.53458e-07 0 4.20011e-06 0.99352 8.23172e-05 0.00513596 0.000828185 739996 9566 CGT ACG 0.000135522 2.64153e-07 0 3.7984e-07 0.000498511 2.48743e-07 0 3.55627e-07 0.991941 0.000201799 0.00600324 0.00121877 429285 6000 CTA TAG 1.68062e-06 6.41982e-06 2.17848e-07 0 2.16779e-07 8.97591e-06 2.72334e-07 0 0.998348 9.6917e-06 0.0013141 0.000310673 562610 2573 CTC GAG 1.27975e-06 1.74424e-05 7.62108e-08 0 9.22619e-08 2.15321e-05 5.44578e-07 0 0.998719 1.61472e-06 0.00104242 0.000195851 1459319 6417 CTG CAG 2.91819e-07 3.00291e-05 5.63287e-08 0 6.88541e-08 3.13859e-05 5.56683e-08 0 0.998024 9.9451e-06 0.00152055 0.000383609 2020139 9821 CTT AAG 3.32019e-07 8.69704e-06 7.82316e-08 0 9.94778e-08 6.15272e-06 8.27933e-08 0 0.998605 5.3214e-06 0.0011582 0.000215604 1408273 5873 GAA TTC 0 9.14092e-08 3.80421e-06 8.48779e-08 0 7.88643e-08 1.0498e-06 2.72867e-07 0.99916 2.51138e-06 0.000678676 0.000152997 1413462 4086 GAC GTC 0 1.28711e-07 3.68377e-06 1.23304e-06 0 1.91451e-07 2.30668e-06 1.89511e-07 0.99898 5.34708e-06 0.000749329 0.00025753 928122 3023 GAG CTC 0 5.44578e-07 2.15321e-05 9.22619e-08 0 7.62108e-08 1.74424e-05 1.27975e-06 0.998719 1.61472e-06 0.00104242 0.000195851 1459319 6417 GAT ATC 0 1.09673e-07 1.05145e-06 1.16198e-07 0 1.24645e-07 2.69965e-06 1.46438e-07 0.999081 8.15792e-06 0.000710886 0.000195637 989351 2950 GCA TGC 2.80804e-06 0 9.01999e-08 9.36484e-05 3.94585e-06 0 8.51342e-08 0.000169468 0.99749 8.1906e-07 0.002086 0.000152923 1364839 9837 GCC GGC 1.89443e-07 0 7.33022e-07 0.00017965 1.53845e-06 0 1.66708e-07 8.28988e-05 0.997707 1.27278e-06 0.00189901 0.00012792 1486111 9499 GCG CGC 2.49054e-07 0 1.7528e-07 0.000662268 6.28442e-07 0 1.79999e-07 0.000721457 0.993604 3.59783e-05 0.00431434 0.00066049 633903 8027 GCT AGC 3.0718e-07 0 8.67198e-08 0.000177195 2.59239e-06 0 8.21767e-08 2.46401e-05 0.997878 1.65029e-06 0.00176439 0.000151153 1433031 9037 GGA TCC 2.87048e-06 7.89153e-08 0 1.0977e-06 1.29986e-05 7.81687e-08 0 1.13204e-06 0.998561 2.62947e-06 0.00130766 0.000110223 1475205 6771 GGC GCC 8.28988e-05 1.66708e-07 0 1.53845e-06 0.00017965 7.33022e-07 0 1.89443e-07 0.997707 1.27278e-06 0.00189901 0.00012792 1486111 9499 GGG CCC 1.60576e-06 8.12457e-08 0 1.51644e-06 0.000182028 8.09716e-08 0 7.30057e-06 0.997831 2.19593e-06 0.00181046 0.000163261 1377761 8784 GGT ACC 6.41459e-06 1.15044e-07 0 1.24513e-06 0.000137537 1.26206e-07 0 1.37808e-06 0.997818 3.63687e-06 0.00184833 0.000182973 1007477 6407 GTA TAC 3.87887e-07 1.14258e-06 1.95928e-07 0 1.91148e-07 2.13021e-06 1.73771e-07 0 0.998666 1.16007e-05 0.00103025 0.00028824 612938 2229 GTC GAC 1.89511e-07 2.30668e-06 1.91451e-07 0 1.23304e-06 3.68377e-06 1.28711e-07 0 0.99898 5.34708e-06 0.000749329 0.00025753 928122 3023 GTG CAC 1.81472e-07 1.07814e-06 1.09283e-07 0 9.72297e-08 2.35475e-06 9.68071e-08 0 0.998507 2.74146e-05 0.00103711 0.000424803 1238342 4265 GTT AAC 1.83495e-07 1.99437e-06 1.57591e-06 0 1.26025e-07 1.47389e-06 1.69214e-07 0 0.998805 1.50565e-05 0.000888904 0.000285121 868539 2684 TAA TTA 0 1.58863e-07 5.64101e-07 1.87099e-07 0 1.62756e-07 6.85646e-07 2.11878e-06 0.99884 6.12976e-06 0.000916009 0.000234141 657190 2153 TAC GTA 0 1.73771e-07 2.13021e-06 1.91148e-07 0 1.95928e-07 1.14258e-06 3.87887e-07 0.998666 1.16007e-05 0.00103025 0.00028824 612938 2229 TAG CTA 0 2.72334e-07 8.97591e-06 2.16779e-07 0 2.17848e-07 6.41982e-06 1.68062e-06 0.998348 9.6917e-06 0.0013141 0.000310673 562610 2573 TAT ATA 0 1.58699e-07 6.29121e-07 2.94723e-07 0 1.73816e-07 5.0618e-07 7.33158e-07 0.99849 2.50346e-05 0.00114316 0.000338944 687766 2501 TCA TGA 7.42769e-06 0 8.4264e-08 1.41463e-05 1.64893e-06 0 9.09748e-08 4.30265e-06 0.998168 1.09406e-06 0.00168008 0.000123382 1357049 7537 TCC GGA 1.13204e-06 0 7.81687e-08 1.29986e-05 1.0977e-06 0 7.89153e-08 2.87048e-06 0.998561 2.62947e-06 0.00130766 0.000110223 1475205 6771 TCG CGA 1.1364e-06 0 2.41143e-07 0.000424714 9.04025e-07 0 2.50577e-07 7.072e-05 0.994664 5.14695e-05 0.00419916 0.000587594 451778 4856 TCT AGA 7.68915e-07 0 8.36115e-08 1.55235e-05 2.37712e-06 0 8.14796e-08 3.44293e-06 0.998345 3.29845e-06 0.00148506 0.000143991 1458811 7385 TGA TCA 4.30265e-06 9.09748e-08 0 1.64893e-06 1.41463e-05 8.4264e-08 0 7.42769e-06 0.998168 1.09406e-06 0.00168008 0.000123382 1357049 7537 TGC GCA 0.000169468 8.51342e-08 0 3.94585e-06 9.36484e-05 9.01999e-08 0 2.80804e-06 0.99749 8.1906e-07 0.002086 0.000152923 1364839 9837 TGG CCA 5.0278e-06 6.54727e-08 0 1.94726e-06 7.93226e-05 2.55261e-07 0 5.16496e-05 0.997848 8.53703e-07 0.00189806 0.000114336 1726616 11512 TGT ACA 2.09978e-05 9.46485e-08 0 1.00748e-06 0.000114438 1.03154e-07 0 1.62448e-06 0.997337 2.62995e-06 0.00230599 0.000216567 1211958 8744 TTA TAA 2.11878e-06 6.85646e-07 1.62756e-07 0 1.87099e-07 5.64101e-07 1.58863e-07 0 0.99884 6.12976e-06 0.000916009 0.000234141 657190 2153 TTC GAA 2.72867e-07 1.0498e-06 7.88643e-08 0 8.48779e-08 3.80421e-06 9.14092e-08 0 0.99916 2.51138e-06 0.000678676 0.000152997 1413462 4086 TTG CAA 1.4021e-07 2.88088e-06 1.04999e-07 0 9.36086e-08 2.1715e-06 1.10146e-07 0 0.998685 9.12061e-06 0.00100336 0.000296664 1184577 4045 TTT AAA 1.28656e-07 5.54024e-07 7.7897e-08 0 9.69531e-08 1.96166e-06 8.90693e-07 0 0.999186 4.82975e-06 0.000656169 0.000149721 1430193 3868