Prefix: s3://natera-rnd-pltf-dev-nextflow-data-01/users/mipeters/semiproductionize/sarek/69812fed/test_regression_recal_dev_b0193075
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|---|---|---|
| /reports/raw_qc/snpeff/mutect2/1029_BG5-T1-TDNA-1_23FC2GLT4_s29_vs_1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-T1-TDNA-1_23FC2GLT4_s29_vs_1029_BG5-N1-BDNA-1_2375WFLT3_s29.mutect2.whatshap.phased_custom.ann_snpEff.genes.txt | Feb 02, 2026 3:49 PM | |
| /annotation/strelka/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21.strelka.somatic_indels_custom.ann_snpEff.ann.vcf.gz.tbi | Feb 02, 2026 3:49 PM | |
| /annotation/strelka/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21.strelka.somatic_indels_custom.ann_snpEff.ann.vcf.gz | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/vcftools/strelka/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.FILTER.summary | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/vcftools/strelka/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.TsTv.qual | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/vcftools/strelka/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.TsTv.count | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/bcftools/strelka/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.bcftools_stats.txt | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/snpeff/strelka/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21.strelka.somatic_indels_custom.ann_snpEff.genes.txt | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/snpeff/strelka/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21.strelka.somatic_indels_custom.ann_snpEff.csv | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/vcftools/tiddit/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.TsTv.count | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/vcftools/tiddit/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.FILTER.summary | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/vcftools/tiddit/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.TsTv.qual | Feb 02, 2026 3:49 PM | |
| /reports/raw_qc/bcftools/tiddit/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.bcftools_stats.txt | Feb 02, 2026 3:48 PM | |
| /variant_calling/strelka/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.vcf.gz.tbi | Feb 02, 2026 3:48 PM | |
| /reports/raw_qc/vcftools/manta/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.TsTv.qual | Feb 02, 2026 3:48 PM | |
| /reports/raw_qc/vcftools/manta/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.FILTER.summary | Feb 02, 2026 3:48 PM | |
| /reports/raw_qc/vcftools/manta/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.TsTv.count | Feb 02, 2026 3:48 PM | |
| /reports/raw_qc/bcftools/manta/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.bcftools_stats.txt | Feb 02, 2026 3:48 PM | |
| /variant_calling/tiddit/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.entropy.entropy.vcf.gz.tbi | Feb 02, 2026 3:48 PM | |
| /annotation/strelka/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21.strelka.somatic_snvs_custom.ann_snpEff.ann.vcf.gz | Feb 02, 2026 3:48 PM |