succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 37s 33s 2s 1s 347.6 MB 766% 41.8 MB 21.7 KB 0 bytes 36.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (1029_BG5-T1-TDNA-1_23FC2GLT4_s29_vs_1029_BG5-N1-BDNA-1_2375WFLT3_s29) 34s 30s 2s 1s 348.1 MB 780% 41.8 MB 15.0 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 44s 29s 12s 2s 1.2 GB 285% 273.5 MB 11.6 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (1029_BG5-T1-TDNA-1_23FC2GLT4_s29_vs_1029_BG5-N1-BDNA-1_2375WFLT3_s29) 44s 31s 12s 0s 1.2 GB 291% 249.2 MB 11.6 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:WHATSHAP_MUTECT2 (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 7m 59s 6s 7m 24s 29s 557.2 MB 100% 17.5 GB 394.4 KB 10.2 GB 436.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:WHATSHAP_MUTECT2 (1029_BG5-T1-TDNA-1_23FC2GLT4_s29_vs_1029_BG5-N1-BDNA-1_2375WFLT3_s29) 4m 59s 6s 4m 32s 21s 554.6 MB 100% 13.2 GB 140.0 KB 10.2 GB 140.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 5m 45s 4s 4m 14s 1m 27s 578.0 MB 117% 44.4 GB 11.9 MB 44.2 GB 1.2 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21) 1m 58s 3s 1m 26s 29s 577.6 MB 138% 17.7 GB 10.5 MB 17.7 GB 992.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BG5-N1-BDNA-1_2375WFLT3_s29) 6m 15s 4s 4m 33s 1m 38s 577.5 MB 117% 49.7 GB 12.1 MB 49.8 GB 1.2 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BG5-T1-TDNA-1_23FC2GLT4_s29) 1m 24s 4s 1m 1s 19s 577.0 MB 161% 13.3 GB 10.3 MB 13.3 GB 924.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:NGSCHECKMATE_NCM (1) 23s 12s 1s 10s 85.6 MB 344% 26.5 MB 12.8 MB 0 bytes 12.8 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 4m 36s 4s 3m 0s 1m 32s 1.9 GB 321% 38.9 GB 656.2 MB 38.5 GB 656.9 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21) 1m 31s 2s 59s 30s 1.9 GB 299% 12.1 GB 118.8 MB 11.8 GB 119.1 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (1029_BG5-N1-BDNA-1_2375WFLT3_s29) 5m 24s 3s 3m 41s 1m 40s 1.9 GB 326% 44.2 GB 699.5 MB 43.8 GB 700.4 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (1029_BG5-T1-TDNA-1_23FC2GLT4_s29) 1m 2s 4s 40s 18s 1.9 GB 258% 7.6 GB 81.0 MB 7.4 GB 81.1 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 10m 52s 4s 9m 21s 1m 27s 11.3 MB 140% 38.5 GB 164.4 KB 38.5 GB 164.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21) 3m 14s 3s 2m 42s 29s 10.2 MB 144% 11.8 GB 145.2 KB 11.8 GB 148.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BG5-N1-BDNA-1_2375WFLT3_s29) 12m 56s 4s 11m 15s 1m 37s 10.3 MB 147% 43.8 GB 166.0 KB 43.8 GB 168.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BG5-T1-TDNA-1_23FC2GLT4_s29) 2m 6s 4s 1m 44s 18s 10.3 MB 145% 7.4 GB 148.7 KB 7.4 GB 148.0 KB 1
succeeded NFCORE_SAREK:SAREK:MULTIQC 1m 6s 14s 38s 13s 782.2 MB 120% 174.6 MB 128.5 MB 0 bytes 122.9 MB 1
2908 items found |
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