NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46) - mipeters-sarek-B23FC2GLT4_largest_sample-2026-01-26_16-36-43z - Workflow Tracker

Runs
mipeters-sar..6_16-36-43z
Tasks
CRAM_FILTER_HLA (p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46)

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Task Info

Status: succeeded
Hash: 2de27b3be925
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA
Tag: p_tis_gDNA_exp3_gDNA_0001_23FC2GLT4_s46
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 64/d76573
Exit Code: -
Container: community.wave.seqera.io/library/sambamba_samtools:0966924e22545fbe
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/d765737f9ac48707dc2b5c522fb9fd
Native ID: nf-64d765737f9ac48707dc2b5c522fb9fd-dd5da

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 12
Memory (peak / alloc): 2.1 GB / 72.0 GB
Process I/O (rchar / wchar): 157.6 GB / 99.2 GB
Disk I/O (read / write): - / 4.8 GB
Host: i-00d6e35f74d7f7e4a ( on-demand)

Runtime

Submitted: Jan 26, 2026 9:56:01 PM
Completed: Jan 27, 2026 12:04:53 AM
Total Duration: 2h 8m

Phases

Queue: 6s
Execution: 2h 6m
Stage/Unstage: 2m 13s

Attempt 3

Execution

Status: failed
Hash: 8b/3ed421
Exit Code: 143
Container: community.wave.seqera.io/library/sambamba_samtools:0966924e22545fbe
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/3ed42183e9859bb82e29acf5579fc9
Native ID: nf-8b3ed42183e9859bb82e29acf5579fc9-9066f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 36.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-00d6e35f74d7f7e4a ( on-demand)

Runtime

Submitted: Jan 26, 2026 9:53:32 PM
Completed: Jan 26, 2026 9:55:51 PM
Total Duration: 2m 18s

Phases

Queue: 14s
Execution: 2m 4s
Stage/Unstage: 0s

Attempt 2

Execution

Status: aborted
Hash: 4b/8e0739
Exit Code: -
Container: community.wave.seqera.io/library/sambamba_samtools:0966924e22545fbe
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4b/8e0739e89a98427a7023dfd9e7a900
Native ID: nf-4b8e0739e89a98427a7023dfd9e7a900-0ea1d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 12
Memory (peak / alloc): - / 72.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-01b87be0cebbbdbe9 ( on-demand)

Runtime

Submitted: Jan 24, 2026 2:08:14 AM
Completed: Jan 24, 2026 2:15:47 AM
Total Duration: -

Phases

Queue: 10s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: failed
Hash: 30/bff82d
Exit Code: 143
Container: community.wave.seqera.io/library/sambamba_samtools:0966924e22545fbe
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/bff82d3a6c7b9bfe1d0daa78c2f344
Native ID: nf-30bff82d3a6c7b9bfe1d0daa78c2f344-23674

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 36.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-01b87be0cebbbdbe9 ( on-demand)

Runtime

Submitted: Jan 24, 2026 2:05:25 AM
Completed: Jan 24, 2026 2:08:06 AM
Total Duration: 2m 40s

Phases

Queue: 10s
Execution: 2m 30s
Stage/Unstage: 0s