NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

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Task Info

Status: succeeded
Hash: 0a1604940756
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 3d/51928e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/51928e5593fdaf2e50455132bcefb1
Native ID: nf-3d51928e5593fdaf2e50455132bcefb1-ca5fb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.9 / 1
Memory (peak / alloc): 307.7 MB / 1.0 GB
Process I/O (rchar / wchar): 38.8 MB / 26.9 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:32:26 PM
Completed: Jan 27, 2026 4:32:35 PM
Total Duration: 8s

Phases

Queue: 5s
Execution: 1s
Stage/Unstage: 2s

Attempt 4

Execution

Status: succeeded - cached
Hash: 08/797a8e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/797a8ec8549afd53f722fa56ac5e0c
Native ID: nf-08797a8ec8549afd53f722fa56ac5e0c-b7b6f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.6 / 1
Memory (peak / alloc): 392.0 MB / 1.0 GB
Process I/O (rchar / wchar): 96.3 MB / 31.2 MB
Disk I/O (read / write): - / 31.3 MB
Host: i-0f2b30a53f7fd60b5 ( spot)

Runtime

Submitted: Jan 27, 2026 5:04:34 PM
Completed: Jan 27, 2026 5:04:47 PM
Total Duration: 12s

Phases

Queue: 5s
Execution: 5s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 48/5047a2
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/5047a248a4cccd6e4197a7846d8d1d
Native ID: nf-485047a248a4cccd6e4197a7846d8d1d-2526c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 9.4 / 1
Memory (peak / alloc): 299.7 MB / 1.0 GB
Process I/O (rchar / wchar): 38.8 MB / 25.6 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-03e17eb1330b9acd1 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:01 PM
Completed: Jan 27, 2026 4:37:09 PM
Total Duration: 7s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 1s

Attempt 2

Execution

Status: succeeded
Hash: fc/4a2a6b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/4a2a6b167cd351c5e624f15a982d42
Native ID: nf-fc4a2a6b167cd351c5e624f15a982d42-f9f25

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.5 / 1
Memory (peak / alloc): 391.7 MB / 1.0 GB
Process I/O (rchar / wchar): 96.0 MB / 31.0 MB
Disk I/O (read / write): - / 31.0 MB
Host: i-0c214cca00f4652c8 ( spot)

Runtime

Submitted: Jan 27, 2026 1:00:26 PM
Completed: Jan 27, 2026 1:00:36 PM
Total Duration: 9s

Phases

Queue: 2s
Execution: 5s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: da/767555
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/76755569272867f153c83571bb2040
Native ID: nf-da76755569272867f153c83571bb2040-11c0b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 13.8 / 1
Memory (peak / alloc): 299.5 MB / 2.0 GB
Process I/O (rchar / wchar): 41.9 MB / 1.8 MB
Disk I/O (read / write): - / 1.8 MB
Host: i-03c74f62a6cf01df8 ( spot)

Runtime

Submitted: Jan 26, 2026 10:38:57 PM
Completed: Jan 26, 2026 10:39:06 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 1s
Stage/Unstage: 3s