NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
TABIX_BGZIPTABIX (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

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Task Info

Status: succeeded
Hash: 1781d432dcf6
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 31/9f0ec7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/9f0ec73660398fc95ad03d2bd952e5
Native ID: nf-319f0ec73660398fc95ad03d2bd952e5-43b82

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.9 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 1.0 MB / 128.8 KB
Disk I/O (read / write): - / 132.0 KB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:34:14 PM
Completed: Jan 27, 2026 4:34:20 PM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 4

Execution

Status: succeeded - cached
Hash: 7c/f0b52b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/f0b52bef65f1273b4a12e5837856bb
Native ID: nf-7cf0b52bef65f1273b4a12e5837856bb-2f8c2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.7 / 1
Memory (peak / alloc): 18.0 MB / 1.0 GB
Process I/O (rchar / wchar): 331.0 MB / 45.6 MB
Disk I/O (read / write): - / 45.7 MB
Host: i-0c4652d5c26da2e61 ( spot)

Runtime

Submitted: Jan 27, 2026 5:09:04 PM
Completed: Jan 27, 2026 5:09:16 PM
Total Duration: 11s

Phases

Queue: 3s
Execution: 6s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: c9/6948c1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c9/6948c198cf34bd933e0dee5d48aa0a
Native ID: nf-c96948c198cf34bd933e0dee5d48aa0a-a12e9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 385.3 KB / 43.7 KB
Disk I/O (read / write): - / 48.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:38:58 PM
Completed: Jan 27, 2026 4:39:04 PM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: d0/9475af
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/9475af7deb664c8b71934a7c80ceda
Native ID: nf-d09475af7deb664c8b71934a7c80ceda-1a3d4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 19.0 MB / 1.0 GB
Process I/O (rchar / wchar): 321.6 MB / 44.9 MB
Disk I/O (read / write): - / 45.1 MB
Host: i-0866f49d6fccf8031 ( spot)

Runtime

Submitted: Jan 27, 2026 1:04:45 PM
Completed: Jan 27, 2026 1:04:55 PM
Total Duration: 9s

Phases

Queue: 2s
Execution: 3s
Stage/Unstage: 4s

Attempt 1

Execution

Status: succeeded
Hash: 79/e00911
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/e00911e92fe7515d5be37593fa4a82
Native ID: nf-79e00911e92fe7515d5be37593fa4a82-cf347

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 6.2 MB / 2.0 GB
Process I/O (rchar / wchar): 16.7 MB / 3.0 MB
Disk I/O (read / write): - / 3.0 MB
Host: i-0f04517ea0b903be7 ( spot)

Runtime

Submitted: Jan 26, 2026 10:40:57 PM
Completed: Jan 26, 2026 10:41:01 PM
Total Duration: 3s

Phases

Queue: 2s
Execution: -
Stage/Unstage: -