NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
ENSEMBLVEP_VEP (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller)

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Task Info

Status: succeeded
Hash: 18ac6cd976d1
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 6a/d5f697
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/d5f6975b1b3f3d0241f9868f486301
Native ID: nf-6ad5f6975b1b3f3d0241f9868f486301-58260

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 4
Memory (peak / alloc): 868.0 MB / 8.0 GB
Process I/O (rchar / wchar): 60.6 GB / 1.7 GB
Disk I/O (read / write): 18.5 GB / 105.0 MB
Host: i-0b9d6d6d5efd9fc9b ( spot)

Runtime

Submitted: Jan 27, 2026 5:09:24 PM
Completed: Jan 27, 2026 5:20:07 PM
Total Duration: 10m 42s

Phases

Queue: 18s
Execution: 10m 9s
Stage/Unstage: 15s

Attempt 4

Execution

Status: succeeded - cached
Hash: 99/fcd802
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/fcd802be83e6fccf44589d6af63b46
Native ID: nf-99fcd802be83e6fccf44589d6af63b46-1cd91

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 4
Memory (peak / alloc): 969.7 MB / 8.0 GB
Process I/O (rchar / wchar): 35.7 GB / 1.1 GB
Disk I/O (read / write): 16.2 GB / 62.8 MB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 7:01:43 PM
Completed: Jan 27, 2026 7:06:44 PM
Total Duration: 5m 1s

Phases

Queue: 4s
Execution: 4m 43s
Stage/Unstage: 14s

Attempt 3

Execution

Status: succeeded
Hash: e2/e7be44
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/e7be44629d69aa41b9867c15e663e6
Native ID: nf-e2e7be44629d69aa41b9867c15e663e6-91f54

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 4
Memory (peak / alloc): 1.0 GB / 8.0 GB
Process I/O (rchar / wchar): 51.9 GB / 1.5 GB
Disk I/O (read / write): 19.2 GB / 91.1 MB
Host: i-0e80aac854e659336 ( spot)

Runtime

Submitted: Jan 27, 2026 4:50:54 PM
Completed: Jan 27, 2026 5:00:16 PM
Total Duration: 9m 21s

Phases

Queue: 22s
Execution: 8m 45s
Stage/Unstage: 14s

Attempt 2

Execution

Status: succeeded
Hash: 3a/5216cb
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/5216cb61f25c80477b746c1c4078e7
Native ID: nf-3a5216cb61f25c80477b746c1c4078e7-909bd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 221.1 MB / 8.0 GB
Process I/O (rchar / wchar): 147.8 MB / 1014.1 KB
Disk I/O (read / write): 153.2 MB / 76.0 KB
Host: i-0675a2f490e8f1b97 ( spot)

Runtime

Submitted: Jan 27, 2026 3:11:13 PM
Completed: Jan 27, 2026 3:11:37 PM
Total Duration: 23s

Phases

Queue: 3s
Execution: 5s
Stage/Unstage: 15s

Attempt 1

Execution

Status: succeeded
Hash: e3/3e3a6c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/3e3a6cb3591fed08e0f746a624ddbc
Native ID: nf-e33e3a6cb3591fed08e0f746a624ddbc-96443

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 4
Memory (peak / alloc): 708.9 MB / 8.0 GB
Process I/O (rchar / wchar): 1.3 GB / 22.7 MB
Disk I/O (read / write): 1.1 GB / 1.2 MB
Host: i-003ae0016151e81e6 ( spot)

Runtime

Submitted: Jan 27, 2026 2:55:28 AM
Completed: Jan 27, 2026 2:56:28 AM
Total Duration: 59s

Phases

Queue: 15s
Execution: 29s
Stage/Unstage: 15s