NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
SNPEFF_SNPEFF (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq)

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Task Info

Status: succeeded
Hash: 22c947505371
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: c2/763d60
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/763d6018a12aa3dd22acfc2377b974
Native ID: nf-c2763d6018a12aa3dd22acfc2377b974-7c2c4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 9.1 / 2
Memory (peak / alloc): 7.2 GB / 8.0 GB
Process I/O (rchar / wchar): 854.2 MB / 2.1 GB
Disk I/O (read / write): 457.3 MB / 2.1 GB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 27, 2026 11:12:40 PM
Completed: Jan 27, 2026 11:22:15 PM
Total Duration: 9m 34s

Phases

Queue: 10s
Execution: 9m 15s
Stage/Unstage: 9s

Attempt 4

Execution

Status: succeeded - cached
Hash: da/7721f6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/7721f623aae3b4e680b181fce2fa71
Native ID: nf-da7721f623aae3b4e680b181fce2fa71-83a72

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.0 / 2
Memory (peak / alloc): 2.5 GB / 8.0 GB
Process I/O (rchar / wchar): 164.8 MB / 3.2 MB
Disk I/O (read / write): - / 316.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:39 PM
Completed: Jan 27, 2026 4:38:20 PM
Total Duration: 40s

Phases

Queue: 12s
Execution: 25s
Stage/Unstage: 3s

Attempt 3

Execution

Status: succeeded
Hash: 2e/202820
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/202820393de1c9a5f52a5dccf819bd
Native ID: nf-2e202820393de1c9a5f52a5dccf819bd-73bb7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.5 / 2
Memory (peak / alloc): 3.0 GB / 8.0 GB
Process I/O (rchar / wchar): 667.1 MB / 422.6 MB
Disk I/O (read / write): - / 419.8 MB
Host: i-00278bbbed4c57908 ( spot)

Runtime

Submitted: Jan 27, 2026 4:35:44 PM
Completed: Jan 27, 2026 4:38:10 PM
Total Duration: 2m 25s

Phases

Queue: 12s
Execution: 2m 7s
Stage/Unstage: 6s

Attempt 2

Execution

Status: succeeded
Hash: 16/b3e5f1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/b3e5f1c7bc1bc8b5ce09c12feb3504
Native ID: nf-16b3e5f1c7bc1bc8b5ce09c12feb3504-5ab43

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 7.5 / 2
Memory (peak / alloc): 3.5 GB / 8.0 GB
Process I/O (rchar / wchar): 668.5 MB / 419.2 MB
Disk I/O (read / write): - / 416.3 MB
Host: i-0868828b50fb5dea1 ( spot)

Runtime

Submitted: Jan 27, 2026 12:42:56 PM
Completed: Jan 27, 2026 12:45:13 PM
Total Duration: 2m 16s

Phases

Queue: 2s
Execution: 2m 9s
Stage/Unstage: 5s

Attempt 1

Execution

Status: succeeded
Hash: 15/1fac26
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/1fac26b47d8bbf4b7e91a4e4296bfa
Native ID: nf-151fac26b47d8bbf4b7e91a4e4296bfa-ecfe6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 2
Memory (peak / alloc): 2.9 GB / 8.0 GB
Process I/O (rchar / wchar): 574.9 MB / 4.3 MB
Disk I/O (read / write): - / 1.5 MB
Host: i-007ce1a49e39348c4 ( spot)

Runtime

Submitted: Jan 26, 2026 9:49:27 PM
Completed: Jan 26, 2026 9:50:27 PM
Total Duration: 59s

Phases

Queue: 3s
Execution: 54s
Stage/Unstage: 2s