NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

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Task Info

Status: succeeded
Hash: 257c98932d59
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: c8/0a377f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/0a377f9438c64bdf4ee1332361a889
Native ID: nf-c80a377f9438c64bdf4ee1332361a889-e98ed

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.1 / 1
Memory (peak / alloc): 387.5 MB / 1.0 GB
Process I/O (rchar / wchar): 107.4 MB / 35.7 MB
Disk I/O (read / write): - / 35.7 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 28, 2026 2:44:51 AM
Completed: Jan 28, 2026 2:45:02 AM
Total Duration: 10s

Phases

Queue: 3s
Execution: 5s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: b2/f5df7f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/f5df7fed8aaad18f9c019673a124ca
Native ID: nf-b2f5df7fed8aaad18f9c019673a124ca-f1431

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.7 / 1
Memory (peak / alloc): 388.0 MB / 1.0 GB
Process I/O (rchar / wchar): 238.1 MB / 77.7 MB
Disk I/O (read / write): - / 77.8 MB
Host: i-0766e96e580fccfd8 ( spot)

Runtime

Submitted: Jan 27, 2026 4:49:04 PM
Completed: Jan 27, 2026 4:49:27 PM
Total Duration: 22s

Phases

Queue: 4s
Execution: 15s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: fb/70c5ea
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/70c5ea185f0f1e88579b03caa37e31
Native ID: nf-fb70c5ea185f0f1e88579b03caa37e31-a7002

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 11.5 / 1
Memory (peak / alloc): 313.0 MB / 1.0 GB
Process I/O (rchar / wchar): 41.0 MB / 1.1 MB
Disk I/O (read / write): - / 1.1 MB
Host: i-09de6507ea61f22f7 ( spot)

Runtime

Submitted: Jan 27, 2026 3:22:09 PM
Completed: Jan 27, 2026 3:22:16 PM
Total Duration: 6s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: b6/4c6218
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/4c62185347ece2cfe0f4247af70fa9
Native ID: nf-b64c62185347ece2cfe0f4247af70fa9-5b170

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.0 / 1
Memory (peak / alloc): 303.6 MB / 2.0 GB
Process I/O (rchar / wchar): 38.8 MB / 39.1 KB
Disk I/O (read / write): - / 52.0 KB
Host: i-06bdc68d0e3915f14 ( spot)

Runtime

Submitted: Jan 27, 2026 3:05:33 AM
Completed: Jan 27, 2026 3:05:41 AM
Total Duration: 7s

Phases

Queue: 4s
Execution: 1s
Stage/Unstage: 2s