NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
SNPEFF_SNPEFF (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

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Task Info

Status: succeeded
Hash: 3602800114eb
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: da/7721f6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/7721f623aae3b4e680b181fce2fa71
Native ID: nf-da7721f623aae3b4e680b181fce2fa71-83a72

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.0 / 2
Memory (peak / alloc): 2.5 GB / 8.0 GB
Process I/O (rchar / wchar): 164.8 MB / 3.2 MB
Disk I/O (read / write): - / 316.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:39 PM
Completed: Jan 27, 2026 4:38:20 PM
Total Duration: 40s

Phases

Queue: 12s
Execution: 25s
Stage/Unstage: 3s

Attempt 4

Execution

Status: succeeded - cached
Hash: a4/9780f0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/9780f0d1f5b9a91fd0e93f97ec54ab
Native ID: nf-a49780f0d1f5b9a91fd0e93f97ec54ab-a2aaf

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.0 / 2
Memory (peak / alloc): 2.7 GB / 8.0 GB
Process I/O (rchar / wchar): 594.4 MB / 3.3 MB
Disk I/O (read / write): - / 420.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:39 PM
Completed: Jan 27, 2026 4:38:50 PM
Total Duration: 1m 10s

Phases

Queue: 12s
Execution: 55s
Stage/Unstage: 3s

Attempt 3

Execution

Status: succeeded
Hash: 1b/e4ede1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/e4ede11fa7d74584f19b7c13d696d4
Native ID: nf-1be4ede11fa7d74584f19b7c13d696d4-df8f1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.2 / 2
Memory (peak / alloc): 2.8 GB / 8.0 GB
Process I/O (rchar / wchar): 482.0 MB / 4.3 MB
Disk I/O (read / write): - / 1.4 MB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:33:05 PM
Completed: Jan 27, 2026 4:34:08 PM
Total Duration: 1m 2s

Phases

Queue: 11s
Execution: 47s
Stage/Unstage: 4s

Attempt 2

Execution

Status: succeeded
Hash: 08/c7f623
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/c7f623de97900231b788a09ee8d54e
Native ID: nf-08c7f623de97900231b788a09ee8d54e-0208b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.3 / 2
Memory (peak / alloc): 2.6 GB / 8.0 GB
Process I/O (rchar / wchar): 471.7 MB / 4.3 MB
Disk I/O (read / write): - / 1.4 MB
Host: i-0868828b50fb5dea1 ( spot)

Runtime

Submitted: Jan 27, 2026 12:40:26 PM
Completed: Jan 27, 2026 12:41:27 PM
Total Duration: 1m 0s

Phases

Queue: 10s
Execution: 46s
Stage/Unstage: 4s

Attempt 1

Execution

Status: succeeded
Hash: 59/62cfe8
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/62cfe8d9bc15a05e2be418547f35a5
Native ID: nf-5962cfe8d9bc15a05e2be418547f35a5-215e0

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.0 / 2
Memory (peak / alloc): 2.9 GB / 8.0 GB
Process I/O (rchar / wchar): 639.9 MB / 15.6 MB
Disk I/O (read / write): - / 12.7 MB
Host: i-007ce1a49e39348c4 ( spot)

Runtime

Submitted: Jan 26, 2026 9:47:47 PM
Completed: Jan 26, 2026 9:48:59 PM
Total Duration: 1m 11s

Phases

Queue: 8s
Execution: 1m 0s
Stage/Unstage: 3s