NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller)

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Task Info

Status: succeeded
Hash: 3ba480962dc3
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 6d/6d1ed6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6d/6d1ed617fc4ce442acba2de028f963
Native ID: nf-6d6d1ed617fc4ce442acba2de028f963-2a2a5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 9.0 / 1
Memory (peak / alloc): 37.9 MB / 1.0 GB
Process I/O (rchar / wchar): 59.4 MB / 31.3 MB
Disk I/O (read / write): - / 31.3 MB
Host: i-05fe37b0e98b9dec7 ( spot)

Runtime

Submitted: Jan 27, 2026 5:05:14 PM
Completed: Jan 27, 2026 5:05:25 PM
Total Duration: 10s

Phases

Queue: 4s
Execution: 4s
Stage/Unstage: 2s

Attempt 4

Execution

Status: succeeded - cached
Hash: 36/d76405
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/d7640511cd87d80b3ecb381f460a3a
Native ID: nf-36d7640511cd87d80b3ecb381f460a3a-11886

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 8.4 / 1
Memory (peak / alloc): 37.5 MB / 1.0 GB
Process I/O (rchar / wchar): 68.7 MB / 35.3 MB
Disk I/O (read / write): - / 35.3 MB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 6:58:32 PM
Completed: Jan 27, 2026 6:58:41 PM
Total Duration: 8s

Phases

Queue: 3s
Execution: 3s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: d6/9e9dd8
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d6/9e9dd828bb17b0524e475ebeb4e389
Native ID: nf-d69e9dd828bb17b0524e475ebeb4e389-cbe1a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 1
Memory (peak / alloc): 36.9 MB / 1.0 GB
Process I/O (rchar / wchar): 51.3 MB / 27.1 MB
Disk I/O (read / write): - / 27.1 MB
Host: i-060fd6816157acc2f ( spot)

Runtime

Submitted: Jan 27, 2026 4:46:43 PM
Completed: Jan 27, 2026 4:46:54 PM
Total Duration: 10s

Phases

Queue: 4s
Execution: 3s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: 1c/968e6c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/968e6c74c3c508846878683c05760e
Native ID: nf-1c968e6c74c3c508846878683c05760e-638ad

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 45.6 / 1
Memory (peak / alloc): 14.4 MB / 1.0 GB
Process I/O (rchar / wchar): 222.0 KB / 25.4 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 3:09:17 PM
Completed: Jan 27, 2026 3:09:25 PM
Total Duration: 7s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 92/43c221
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/43c22139a4efe55b22035c2b247b8c
Native ID: nf-9243c22139a4efe55b22035c2b247b8c-38253

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 11.5 / 1
Memory (peak / alloc): 12.3 MB / 2.0 GB
Process I/O (rchar / wchar): 1.0 MB / 478.8 KB
Disk I/O (read / write): - / 484.0 KB
Host: i-046710c9fd888210b ( spot)

Runtime

Submitted: Jan 27, 2026 2:53:38 AM
Completed: Jan 27, 2026 2:53:46 AM
Total Duration: 7s

Phases

Queue: 6s
Execution: -
Stage/Unstage: -