NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
TABIX_BGZIPTABIX (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

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Task Info

Status: succeeded
Hash: 4434803d40b3
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: c9/6948c1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c9/6948c198cf34bd933e0dee5d48aa0a
Native ID: nf-c96948c198cf34bd933e0dee5d48aa0a-a12e9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 385.3 KB / 43.7 KB
Disk I/O (read / write): - / 48.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:38:58 PM
Completed: Jan 27, 2026 4:39:04 PM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 4

Execution

Status: succeeded - cached
Hash: 31/9f0ec7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/9f0ec73660398fc95ad03d2bd952e5
Native ID: nf-319f0ec73660398fc95ad03d2bd952e5-43b82

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.9 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 1.0 MB / 128.8 KB
Disk I/O (read / write): - / 132.0 KB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:34:14 PM
Completed: Jan 27, 2026 4:34:20 PM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded
Hash: 88/e59c0b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/e59c0bc3b8ad99b898616f2ecaee3a
Native ID: nf-88e59c0bc3b8ad99b898616f2ecaee3a-c02aa

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 3.2 MB / 1.0 GB
Process I/O (rchar / wchar): 325.6 KB / 30.1 KB
Disk I/O (read / write): - / 32.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:38:30 PM
Completed: Jan 27, 2026 4:38:34 PM
Total Duration: 3s

Phases

Queue: 2s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: bc/3b0e92
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/3b0e9253a53583f44aedd9667fd5cf
Native ID: nf-bc3b0e9253a53583f44aedd9667fd5cf-b7179

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 6.1 MB / 1.0 GB
Process I/O (rchar / wchar): 6.7 MB / 948.3 KB
Disk I/O (read / write): - / 952.0 KB
Host: i-08d30457a93efd5a9 ( spot)

Runtime

Submitted: Jan 27, 2026 12:51:55 PM
Completed: Jan 27, 2026 12:52:01 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 7e/fdc933
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/fdc9337eb7f916c4b77fe69808fecb
Native ID: nf-7efdc9337eb7f916c4b77fe69808fecb-1515b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 6.1 MB / 2.0 GB
Process I/O (rchar / wchar): 2.4 MB / 353.5 KB
Disk I/O (read / write): - / 360.0 KB
Host: i-0a3db75041a6b49c1 ( spot)

Runtime

Submitted: Jan 26, 2026 9:52:47 PM
Completed: Jan 26, 2026 9:52:52 PM
Total Duration: 4s

Phases

Queue: 2s
Execution: -
Stage/Unstage: -