NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_SUMMARY (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
VCFTOOLS_SUMMARY (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

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Task Info

Status: succeeded
Hash: 46171f7506e7
Process: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_SUMMARY
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: bf/7a2dd9
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/7a2dd960593aa89f7031473d0a2a19
Native ID: nf-bf7a2dd960593aa89f7031473d0a2a19-75f11

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.8 / 1
Memory (peak / alloc): 9.9 MB / 1.0 GB
Process I/O (rchar / wchar): 78.3 KB / 2.6 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0871dc4d898f98e3a ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:00 PM
Completed: Jan 27, 2026 4:37:06 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 4

Execution

Status: succeeded - cached
Hash: a8/94d7df
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/94d7df46ca2bd5bbcd474cac1348e9
Native ID: nf-a894d7df46ca2bd5bbcd474cac1348e9-fa97e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 1
Memory (peak / alloc): 11.1 MB / 1.0 GB
Process I/O (rchar / wchar): 71.2 KB / 1.7 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0766e96e580fccfd8 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:00 PM
Completed: Jan 27, 2026 4:37:06 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded
Hash: 27/9fcd64
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/9fcd64f74dcd7c80cf0a0ba15d032a
Native ID: nf-279fcd64f74dcd7c80cf0a0ba15d032a-ace2c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.6 MB / 1.0 GB
Process I/O (rchar / wchar): 24.9 MB / 5.2 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-015ca7ef1c334fac7 ( spot)

Runtime

Submitted: Jan 27, 2026 4:34:44 PM
Completed: Jan 27, 2026 4:34:53 PM
Total Duration: 8s

Phases

Queue: 2s
Execution: 3s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: e1/e024a3
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/e024a3f8402b5b10f5f117808b2a79
Native ID: nf-e1e024a3f8402b5b10f5f117808b2a79-c2d78

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.5 MB / 1.0 GB
Process I/O (rchar / wchar): 26.3 MB / 5.2 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0868828b50fb5dea1 ( spot)

Runtime

Submitted: Jan 27, 2026 12:41:56 PM
Completed: Jan 27, 2026 12:42:06 PM
Total Duration: 9s

Phases

Queue: 3s
Execution: 3s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: e7/ade8ce
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/ade8cee1dc664b0bd1aff4ee8b0cef
Native ID: nf-e7ade8cee1dc664b0bd1aff4ee8b0cef-a8222

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 11.8 MB / 2.0 GB
Process I/O (rchar / wchar): 76.2 KB / 2.4 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0a3db75041a6b49c1 ( spot)

Runtime

Submitted: Jan 26, 2026 9:48:57 PM
Completed: Jan 26, 2026 9:49:04 PM
Total Duration: 6s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -