NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
GATK4_GATHERBQSRREPORTS (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32)

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Task Info

Status: succeeded
Hash: 4bb26fa35ca7
Process: NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 46/bc3433
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/gatk4:4.5.0.0--py36hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/bc34338db9300331c3ac18d79a7f6b
Native ID: nf-46bc34338db9300331c3ac18d79a7f6b-aaa5c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.2 / 1
Memory (peak / alloc): 482.0 MB / 4.0 GB
Process I/O (rchar / wchar): 111.9 MB / 807.3 KB
Disk I/O (read / write): - / 804.0 KB
Host: i-0a0d7aaa97afcf611 ( spot)

Runtime

Submitted: Jan 27, 2026 11:59:49 AM
Completed: Jan 27, 2026 12:00:09 PM
Total Duration: 19s

Phases

Queue: 2s
Execution: 3s
Stage/Unstage: 14s

Attempt 1

Execution

Status: succeeded
Hash: 32/23971b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/gatk4:4.5.0.0--py36hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/32/23971bbaf14568c478b37b041e7bb0
Native ID: nf-3223971bbaf14568c478b37b041e7bb0-3abb9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.4 / 1
Memory (peak / alloc): 228.8 MB / 4.0 GB
Process I/O (rchar / wchar): 96.0 MB / 800.4 KB
Disk I/O (read / write): - / 804.0 KB
Host: i-03c74f62a6cf01df8 ( spot)

Runtime

Submitted: Jan 26, 2026 9:03:06 PM
Completed: Jan 26, 2026 9:03:14 PM
Total Duration: 7s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 3s