NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
ENSEMBLVEP_VEP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

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Task Info

Status: succeeded
Hash: 5de0ad6494b8
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: b5/ee6296
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b5/ee6296deb9892cb62828c40714ac78
Native ID: nf-b5ee6296deb9892cb62828c40714ac78-92cd7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 4
Memory (peak / alloc): 963.1 MB / 8.0 GB
Process I/O (rchar / wchar): 35.7 GB / 1.1 GB
Disk I/O (read / write): 16.6 GB / 63.4 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 28, 2026 2:48:30 AM
Completed: Jan 28, 2026 2:53:30 AM
Total Duration: 4m 59s

Phases

Queue: 3s
Execution: 4m 45s
Stage/Unstage: 11s

Attempt 3

Execution

Status: succeeded
Hash: 8f/603530
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/60353073ea9cf3805849d858e9caca
Native ID: nf-8f60353073ea9cf3805849d858e9caca-21d13

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.3 / 4
Memory (peak / alloc): 807.7 MB / 8.0 GB
Process I/O (rchar / wchar): 161.0 GB / 4.0 GB
Disk I/O (read / write): 19.1 GB / 160.7 MB
Host: i-0f8e64933396e24b0 ( spot)

Runtime

Submitted: Jan 27, 2026 4:52:34 PM
Completed: Jan 27, 2026 5:13:37 PM
Total Duration: 21m 2s

Phases

Queue: 17s
Execution: 20m 26s
Stage/Unstage: 19s

Attempt 2

Execution

Status: succeeded
Hash: 40/07ae3d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/07ae3d85fbfa487d61d08ea736b003
Native ID: nf-4007ae3d85fbfa487d61d08ea736b003-858b1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.5 / 4
Memory (peak / alloc): 2.0 GB / 8.0 GB
Process I/O (rchar / wchar): 3.5 GB / 39.8 MB
Disk I/O (read / write): 6.7 GB / 2.9 MB
Host: i-0ed8dea3ccd31f222 ( spot)

Runtime

Submitted: Jan 27, 2026 3:24:18 PM
Completed: Jan 27, 2026 3:25:23 PM
Total Duration: 1m 4s

Phases

Queue: 18s
Execution: 33s
Stage/Unstage: 13s

Attempt 1

Execution

Status: succeeded
Hash: 36/9ee468
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/9ee46879d7e2a571b5ff64ddc9af6c
Native ID: nf-369ee46879d7e2a571b5ff64ddc9af6c-4c6cd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 197.3 MB / 8.0 GB
Process I/O (rchar / wchar): 88.8 MB / 918.9 KB
Disk I/O (read / write): 74.9 MB / 64.0 KB
Host: i-0e450686eedbc515b ( spot)

Runtime

Submitted: Jan 27, 2026 3:07:21 AM
Completed: Jan 27, 2026 3:07:57 AM
Total Duration: 35s

Phases

Queue: 16s
Execution: 3s
Stage/Unstage: 16s